CN185229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP3_BOVIN (Actin-related protein 3 OS=Bos taurus GN=ACTR3 PE=1 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 8.493e-39 Identity = 87/194 (44.85%), Postives = 114/194 (58.76%), Query Frame = 3 Query: 114 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 V D GTG K G+AG+ P+ + PS VG VM G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + I + +AGRD+T Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP3_YEAST (Actin-related protein 3 OS=Saccharomyces cerevisiae GN=ARP3 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.892e-38 Identity = 90/231 (38.96%), Postives = 124/231 (53.68%), Query Frame = 3 Query: 111 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGR--PRHTGVMVGMGQKDA----------------------------------------YVGDEA--QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 +V DNGTG+ K GFAG+D+P VFP+ + P +T G+G A Y+G+EA S+ +L YPI HG V NWD ME+ W ++ + LR PE+H LLTE PLNP NRE++ +I FE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + AI + +AGRD+T Sbjct: 9 VVMDNGTGLTKLGFAGNDSPSWVFPTAIATAAPSNTKKSSGVGAPSAVSNEASYFGNSTSATNFNGATGGLLSNNLSGKRGTEDLDFYIGNEALVASQGPSYSLSYPIRHGQVENWDHMERFWENSIFKYLRTEPEDHFFLLTEPPLNPPENREQVAEIFFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVIDSGDGVTHVIPVAEGYVIGSAIKNIPIAGRDIT 239
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACTL9_HUMAN (Actin-like protein 9 OS=Homo sapiens GN=ACTL9 PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 1.892e-38 Identity = 80/179 (44.69%), Postives = 112/179 (62.57%), Query Frame = 3 Query: 111 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 +V D GTG K GFAG +P +I+G G ++G+ A+ LTL P+ GIV +WD E IW H ++LRVA +HP+L ++ P +P NREK+ ++ FE+ PAMYVA Q+VLS+YA GR +G+V+D+G GV++TVP+++GY L HA RLDLAG LT Sbjct: 52 VVIDMGTGTCKVGFAGQASPTYTVATILGCQPKKPATSGQSGLQTFIGEAARVLPE-LTLVQPLRSGIVVDWDAAELIWRHLLEHDLRVATHDHPLLFSDPPFSPATNREKLVEVAFESLRSPAMYVASQSVLSVYAHGRVSGLVVDTGHGVTYTVPVFQGYNLLHATERLDLAGNHLT 229
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL7B_HUMAN (Actin-like protein 7B OS=Homo sapiens GN=ACTL7B PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.892e-38 Identity = 79/185 (42.70%), Postives = 116/185 (62.70%), Query Frame = 3 Query: 102 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 I+ ++ D G+ K G+AG+ P S VG+ G +K VG E + L L P++HGIV +WD ++ IW + F +++ PEEH VL+++ PL+P +NREK ++MFETF +PAM+V Q++LS+Y+ G+T+G+V++SG GVSH VPI EG LP R D AG DLT+ L Sbjct: 49 IKAVIIDLGSQYCKCGYAGEPRPTYFISSTVGKRCPEAADAGDTRKWTLVGHELLNTEAPLKLVNPLKHGIVVDWDCVQDIWEYIFRTAMKILPEEHAVLVSDPPLSPSSNREKYAELMFETFGIPAMHVTSQSLLSIYSYGKTSGLVVESGHGVSHVVPISEGDVLPGLTSRADYAGGDLTNYL 233
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP3_DROME (Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=1 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 2.471e-38 Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 114 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 V D GTG K GFAG+ P+ + PS VG + G+ D ++GDEA G ++KYP+ HG+V +WD ME+ + LR PE+H LLTE PLN NRE +IMFETFNVP +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGR++T Sbjct: 9 VIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATGY-SIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNIT 201
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP3_TAKRU (Actin-related protein 3 OS=Takifugu rubripes GN=actr3 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.227e-38 Identity = 86/194 (44.33%), Postives = 114/194 (58.76%), Query Frame = 3 Query: 114 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 V D GTG K G+AG+ P+ + PS VG +M G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + I + +AGRD+T Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIMPSCIAIKESSKVGDQAQRRMMRGVDDLDFFIGDEAIDKPPYAT-KWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL7B_MACFA (Actin-like protein 7B OS=Macaca fascicularis GN=ACTL7B PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.190e-38 Identity = 79/185 (42.70%), Postives = 115/185 (62.16%), Query Frame = 3 Query: 102 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 I+ +V D G+ K G+AG+ P S VG+ G +K VG E + L L P++HGIV +WD ++ IW + F +++ PEEH VL+++ PL+P +NREK ++MF TF +PAM+V Q++LS+Y+ G+T+G+V++SG GVSH VPI EG LP R D AG DLT+ L Sbjct: 49 IKAVVIDLGSQYCKCGYAGEPRPTYFISSTVGKRCPEAADAGDTRKGTLVGHELLNTETPLKLVNPLKHGIVVDWDCVQDIWEYIFRTAMKILPEEHAVLVSDPPLSPSSNREKYAELMFGTFGIPAMHVTSQSLLSIYSYGKTSGLVVESGHGVSHVVPISEGDVLPGLTSRADYAGGDLTNYL 233
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP3_CHICK (Actin-related protein 3 OS=Gallus gallus GN=ACTR3 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.226e-37 Identity = 84/194 (43.30%), Postives = 113/194 (58.25%), Query Frame = 3 Query: 114 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 V D GTG K G+AG+ P+ + PS + V + G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H LLTE PLN NRE +IMFE+FNVP +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + I + +AGRD+T Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVVDQAQRRVLKGVDDLDFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP3_ARATH (Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.038e-36 Identity = 84/205 (40.98%), Postives = 115/205 (56.10%), Query Frame = 3 Query: 111 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 +V DNGTG K GFAG+ P + P++V + GV + D Y+GDEA +K L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FETFNVP +Y+A+ +VL+L A T TG+V+D GDG +H VP+ EGY + I + +AG+D+T Sbjct: 9 IVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL---DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVT 210
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP4_ARATH (Actin-related protein 4 OS=Arabidopsis thaliana GN=ARP4 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35 Identity = 79/213 (37.09%), Postives = 120/213 (56.34%), Query Frame = 3 Query: 84 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG---------------------RPRHTGVMVGMGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 M +++ +V D G+ KAG+AG+DAP+AVFPS++G T ++ YVG +A S +R + + PI+ GIVS+WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE + VPA+++A VL+ +A+GR T +V+D G G + P+++GY L A++ L G LTD L Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCL 213 The following BLAST results are available for this feature:
BLAST of CN185229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 473
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185229 ID=CN185229; Name=CN185229; organism=Citrus sinensis; type=EST; length=656bpback to top |