CN185229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSJ (Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.440e-35 Identity = 84/213 (39.44%), Postives = 117/213 (54.93%), Query Frame = 3 Query: 90 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 DA +V DNGTG K GFAG+ P + P++V G+ R GVM + D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H LLTE+PL P RE +IMFETFNVP +Y+A Q VL+L A T TG+V+D GDG +H VP+ +GY + +I + + G+D+T Sbjct: 2 DAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVT 211
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSI (Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 7.440e-35 Identity = 84/213 (39.44%), Postives = 117/213 (54.93%), Query Frame = 3 Query: 90 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 DA +V DNGTG K GFAG+ P + P++V G+ R GVM + D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H LLTE+PL P RE +IMFETFNVP +Y+A Q VL+L A T TG+V+D GDG +H VP+ +GY + +I + + G+D+T Sbjct: 2 DAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVT 211
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP4_ORYSJ (Actin-related protein 4 OS=Oryza sativa subsp. japonica GN=ARP4 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34 Identity = 75/216 (34.72%), Postives = 117/216 (54.17%), Query Frame = 3 Query: 84 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG-------------------------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 M +++ +V D G+ KAG+AGDD P+AVFPS+VG TG V ++ YVG E + +R + + P++ G V++WD ++ IW+H F L + PEEHP+L+ E N REK ++MFE + VPA+++A AVL+ +ASGR T +V+DSG G + +++GY L ++ + G LTD + Sbjct: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASDSKNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCM 216
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP4_ORYSI (Actin-related protein 4 OS=Oryza sativa subsp. indica GN=ARP4 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34 Identity = 75/216 (34.72%), Postives = 117/216 (54.17%), Query Frame = 3 Query: 84 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG-------------------------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 M +++ +V D G+ KAG+AGDD P+AVFPS+VG TG V ++ YVG E + +R + + P++ G V++WD ++ IW+H F L + PEEHP+L+ E N REK ++MFE + VPA+++A AVL+ +ASGR T +V+DSG G + +++GY L ++ + G LTD + Sbjct: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASDSKNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCM 216
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL6B_RAT (Actin-like protein 6B OS=Rattus norvegicus GN=Actl6b PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 68/188 (36.17%), Postives = 115/188 (61.17%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--RPRHTGVMVGMGQKDA-----YVGDEA-QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 +++ LV D G+ V+AG+AG+D P+A FP+ VG G + G+K+ ++ A R + P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N+PA ++ AVL+ +A+GR+TG+VLDSG + +P+++GY L I++ LAG Sbjct: 9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAG 196
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL6B_MOUSE (Actin-like protein 6B OS=Mus musculus GN=Actl6b PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 68/188 (36.17%), Postives = 115/188 (61.17%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--RPRHTGVMVGMGQKDA-----YVGDEA-QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 +++ LV D G+ V+AG+AG+D P+A FP+ VG G + G+K+ ++ A R + P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N+PA ++ AVL+ +A+GR+TG+VLDSG + +P+++GY L I++ LAG Sbjct: 9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAG 196
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL6B_BOVIN (Actin-like protein 6B OS=Bos taurus GN=ACTL6B PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 68/188 (36.17%), Postives = 115/188 (61.17%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--RPRHTGVMVGMGQKDA-----YVGDEA-QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 +++ LV D G+ V+AG+AG+D P+A FP+ VG G + G+K+ ++ A R + P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N+PA ++ AVL+ +A+GR+TG+VLDSG + +P+++GY L I++ LAG Sbjct: 9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAG 196
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL6B_HUMAN (Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 68/188 (36.17%), Postives = 114/188 (60.64%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--RPRHTGVMVGMGQKDA-----YVGDEA-QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 +++ LV D G+ V+AG+AG+D P+A FP+ VG G + G K+ ++ A R + P+++G++ +W+ I HT+ ++ P HPVL++EAP N +A REK+T++MFE +N+PA ++ AVL+ +A+GR+TG+VLDSG + +P+++GY L I++ LAG Sbjct: 9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAG 196
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL6A_MACFA (Actin-like protein 6A OS=Macaca fascicularis GN=ACTL6A PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 69/195 (35.38%), Postives = 117/195 (60.00%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG----RPRHTGVMVGMGQKDA------YVGDEA-QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 +++ LV D G+ V+AG+AG+D P+ FP+ +G R + +M G K Y+ A + R + P+++G+V +WD + I HT+ ++ HPVL++EAP N +A REK+T++MFE +N+PA ++ AVL+ +A+GR+TG++LDSG + +P+++GY L I++ LAG +T Sbjct: 9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIATNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIT 203
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL6A_HUMAN (Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.605e-29 Identity = 68/195 (34.87%), Postives = 116/195 (59.49%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG----RPRHTGVMVGMGQKDAYVG-------DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 +++ LV D G+ V+AG+AG+D P+ FP+ +G R + +M G K G + + R + P+++G+V +WD + I HT+ ++ HPVL++EAP N +A REK+T++MFE +N+PA ++ AVL+ +A+GR+TG++LDSG + +P+++GY L I++ LAG +T Sbjct: 9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIT 203 The following BLAST results are available for this feature:
BLAST of CN185229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 473
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185229 ID=CN185229; Name=CN185229; organism=Citrus sinensis; type=EST; length=656bpback to top |