CN185229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 6.101e-29 Identity = 67/195 (34.36%), Postives = 116/195 (59.49%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG----RPRHTGVMVGMGQKDAYVG-------DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 +++ LV D G+ V+AG+AG+D P+ FP+ +G R + +M G K G + + R + P+++G+V +WD + I HT+ ++ HPVL++EAP N +A REK+T++MFE +++PA ++ AVL+ +A+GR+TG++LDSG + +P+++GY L I++ LAG +T Sbjct: 9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIT 203
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACTL8_HUMAN (Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.834e-26 Identity = 68/187 (36.36%), Postives = 105/187 (56.15%), Query Frame = 3 Query: 111 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGR--------PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 ++ D+G+G +KAG AG + P+ VFP+IV P + V +G + T YPIE G + NW+ ++ +W N R E PV++TE PL A+R+KM +I+FE +VP++ +A Q +SLYASG TG+V+DSG G++ P ++G LP + L+ AG+DL+ Sbjct: 6 VIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPSYARRRVSLGIDICHPD----------TFSYPIERGRILNWEGVQYLWSFVLENHRR-EQEVPPVIITETPLREPADRKKMLEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQGRPLPASGKTLEFAGQDLS 181
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACT1_PSEMZ (Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.434e-22 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 Query: 294 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 428 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK Sbjct: 1 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 45
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.232e-21 Identity = 46/118 (38.98%), Postives = 77/118 (65.25%), Query Frame = 3 Query: 294 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 +PI+HG+V +WD +E +W L+V PE+ PVL++++P P REK+ +++FE VPA ++A A+L+L + G +G+ +++G GV H PIY G++ A RL++AG L+ Sbjct: 37 HPIKHGVVVDWDALEGLWERLMVGGLQVHPEQWPVLVSDSPSAPPKGREKVAELLFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATPIYAGHSWHKATFRLNVAGSTLS 154
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP5_SCHPO (Actin-like protein arp5 OS=Schizosaccharomyces pombe GN=arp5 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.232e-21 Identity = 57/179 (31.84%), Postives = 99/179 (55.31%), Query Frame = 3 Query: 108 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 PLV DNG+ ++AG+ G+ P+ VF ++V R R + + VG++ + G ++ + P E ++SNWD ME++ +TF +L + EHP+ +TE NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+ G Sbjct: 26 PLVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGG 199
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSJ (Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 3 Query: 102 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 650 ++ +V D G+ ++KAG A D +P V PS + + +D +GD A + + P+ G V +WD ME + ++ Y+ + +E +L TE PKA RE++ Q+MFE FNV Y + QAVLSLYA GR +G +D G G P+ EG A R D+ G DLT+ Sbjct: 1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTN 171
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSI (Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 3 Query: 102 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 650 ++ +V D G+ ++KAG A D +P V PS + + +D +GD A + + P+ G V +WD ME + ++ Y+ + +E +L TE PKA RE++ Q+MFE FNV Y + QAVLSLYA GR +G +D G G P+ EG A R D+ G DLT+ Sbjct: 1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTN 171
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21 Identity = 70/184 (38.04%), Postives = 95/184 (51.63%), Query Frame = 3 Query: 102 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 ++ LV D G+ +KAG A D +P + PS + R MV G A D + +TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFNV Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT Sbjct: 1 MEALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELT 174
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP4_SCHPO (Actin-related protein 4 OS=Schizosaccharomyces pombe GN=arp4 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20 Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 +++ +V D G+ + GF+G+D P+ V PS G + G + Y+ +S G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G + D L Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDIL 187
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.964e-20 Identity = 57/187 (30.48%), Postives = 93/187 (49.73%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY-------VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 +++ LV D G+ + G+AG+D P+ V + G V + + VGD A + + +P+ GIV++WD ++ IW ++ L + HP++LTE N +AN+ K +I FE+ VPA Y+ AV S +A+G+ +VLD G V+ P+ +G L R AG Sbjct: 14 DEVATLVIDTGSSYTRVGYAGEDTPKLVVSTECGLMADEDVEMEDDTSNTTKKLNKYKVGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLAR-LNADTKTHPLMLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVTPVIDGLVLYKPARRSQYAG 199 The following BLAST results are available for this feature:
BLAST of CN185229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 473
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185229 ID=CN185229; Name=CN185229; organism=Citrus sinensis; type=EST; length=656bpback to top |