CN185229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP4_KLULA (Actin-related protein 4 OS=Kluyveromyces lactis GN=ARP4 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 51/184 (27.72%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 644 ++I +V D G+ + G++G D P+++ PS G G K + R + +K +E+ + +WD ++ W + +L+ + PVLLTE N +A+R+K +I+ E+ A Y+A + +A GR T +V+D G VS P+ +G L + R +AG+ L Sbjct: 12 DEINAIVIDPGSFVTNIGYSGTDCPQSIMPSSYGNVETDG-----DTKRIFNEQPLLFPRAGMEIKPIVENSTIVDWDRAQEQWEYALNTDLKFESNKGTPVLLTEPIWNSEASRKKSLEILLESMEFEACYLAANSSAVSFAMGRPTCLVVDIGHDVSTVSPVIDGMTLSKSSTRNYVAGKYL 190
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP6_NEUCR (Actin-like protein arp-6 OS=Neurospora crassa GN=arp-6 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 62/205 (30.24%), Postives = 97/205 (47.32%), Query Frame = 3 Query: 111 LVCDNGTGMVKAGFAGDDA----PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNE---LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY----ASGRTTGIVLDS--------GDGVSHT--VPIYEGYALPHAILRLDLAGRDLTDAL 656 LV DNG +KAGF DD PR + P+ + R RH + YVG E + + L + P+E G + NW+ ++IW F+++ + P + ++LTE P + + + QI+FE + + Y + V + Y + RT +DS G SHT PI +G L AI RLD+ G+ +T+ L Sbjct: 22 LVLDNGADTIKAGFVSDDKSDGKPR-IIPNCLARDRHRKI---------YVGSELEKCKDFSELAFRRPVEKGFIVNWEAQKEIWDREFFDDKAAQKCDPSDTRLILTEQPNSLPSLQTHCDQIVFEEYGFASYYRGLGPVFNAYRDIQSIFRTPQSTIDSPAQVILLIDSGYSHTTVTPILQGRPLHPAIRRLDVGGKLMTNYL 216
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP5_YEAST (Actin-related protein 5 OS=Saccharomyces cerevisiae GN=ARP5 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 52/190 (27.37%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 108 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY---ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 P+ D G+ ++AGF P +FP+ + + R + + +VG++ + + + + P + V+NW+ E+I +TF++ L V P+ +P+LLTE ++ R QI+FET+NVP + I ++ S Y SG TG+V+ G ++ +P+ +G + R++ G D L Sbjct: 39 PIAIDFGSSKLRAGFVNHATPTHIFPNALTKFRDRK----LNKNFTFVGNDTLLDQAVRSQSRSPFDGPFVTNWNLTEEILDYTFHH-LGVVPDNGIPNPILLTERLATVQSQRTNWYQILFETYNVPGVTFGIDSLFSFYNYNPSGNKTGLVISCGHEDTNVIPVVDGAGILTDAKRINWGGHQAVDYL 223
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP4_YEAST (Actin-related protein 4 OS=Saccharomyces cerevisiae GN=ARP4 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 51/182 (28.02%), Postives = 84/182 (46.15%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 638 +++ +V D G+ G++G D P+++ PS+ G+ G K + R LK IE+G+V +WD ++ W NEL + P LLTE N NR+K +++ E A Y+A + +A+GR +V+D G PI +G L + R +AG+ Sbjct: 12 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGK-----YTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGK 188
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP5_AEDAE (Actin-related protein 5 OS=Aedes aegypti GN=Arp5 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15 Identity = 48/183 (26.23%), Postives = 94/183 (51.37%), Query Frame = 3 Query: 111 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQ---KDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYAS-GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 +V DNG+ +AG+AG D P VF +++ +PR + +G++ + + L+ + +V++ E+I+ + F L + + HPVLLTE NP +R M+++MFE + +P + A+ +LS + G+ +G+++ G +H +P+ G + + R++L G Sbjct: 30 IVIDNGSYHCRAGWAGKDVPSLVFKNVLAKPRKDRSKKDTSEVVVPTVQIGNDITNIEAVRFQLRTQFDRNVVTHLHVQEQIFDYLF-GRLGINADGCVPHPVLLTECVANPNYSRMLMSELMFECYGIPGIVYAVDGLLSYRMNGGQDSGLIVSCGYQATHVIPVLNGRMVEDKVRRINLGG 211
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP5_DICDI (Actin-related protein 5 OS=Dictyostelium discoideum GN=arpE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.543e-14 Identity = 53/191 (27.75%), Postives = 98/191 (51.31%), Query Frame = 3 Query: 108 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYA------SGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDAL 656 P++ DNG+ +AGFA D +P+ +F S+VG+ + T +VG K+ GD ++ LT+K P + ++ + E I+ + F+ E+PVL+TE NP R+ M++++FE +N+ ++ I ++ S Y G +++ S +H + + Y + H R+++ G TD L Sbjct: 32 PIIIDNGSYQCRAGFANDISPKLIFRSLVGKVKSTSSPIVGNSLKE---GDISR-----LTIKSPFDSNLLVHPPSQESIFDYIFHKFGIENEIENPVLITEPTSNPTFCRKYMSELLFECYNIKSVVYGIDSLFSFYGQRDQFKDGGKNSLIIGSSFNTTHIYNV-QNYNVSHQQTKRINIGGGASTDYL 213
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP5_CHICK (Actin-related protein 5 OS=Gallus gallus GN=ACTR5 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.543e-14 Identity = 57/189 (30.16%), Postives = 95/189 (50.26%), Query Frame = 3 Query: 108 PLVCDNGTGMVKAGFAGDDA-----PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL-TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 PLV DNG+ +AG+A D P F S+ R R G G G + VG++ S + L+ P + + + E ++ H F L VA + +HP++LTEA NP +R+ M++++FE + VP + + ++ S Y + R +G+V+ SG +H +P+ EG R++L G Sbjct: 33 PLVIDNGSFQTRAGWAAADPSVPAEPLLRFRSLAARSR--GARGGAGA-ETQVGNDLGSPEPLRWLLRSPFDRNVPVQLELQELLFDHVF-QRLGVASQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYQVPKVSYGVDSLYSFYHNRRQNWPCSGLVISSGYQCTHILPVLEGRLDAKNCKRINLGG 217
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP11_HUMAN (Actin-related protein 11 OS=Homo sapiens GN=ARP11 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 456 MFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 MFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGRD+T Sbjct: 1 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 72
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP4_CANGA (Actin-related protein 4 OS=Candida glabrata GN=ARP4 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13 Identity = 48/195 (24.62%), Postives = 81/195 (41.54%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD-------AYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 ++I ++ D G+ G+AG D P+++ PS G + + R +K +E+G V +WD + W NEL + P +LTE N K NR K +I+ E A Y+ + +A+GR +++D G ++ P+ +G +L + AGR L L Sbjct: 12 DEITAVIIDPGSYTTNIGYAGTDCPQSILPSSFGEIHEAEESTSEDNTEKTRKTRKVFSEQSIPIPRPDYEVKRVVENGQVCDWDSAVEQWSWALRNELHIESNRGIPAMLTEPLWNSKENRSKSLEILLEGMEFEACYLTATSTAVSFATGRPNSLIVDIGHDIASVTPVIDGMSLSKSTRCNHFAGRFLNKLL 206
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP7_YEAST (Actin-related protein 7 OS=Saccharomyces cerevisiae GN=ARP7 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.593e-13 Identity = 44/179 (24.58%), Postives = 84/179 (46.93%), Query Frame = 3 Query: 111 LVCDNGTGMVKAGFAGDDAPRAVFPS-IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR---EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 +V NG+ AGF+ + P+ + PS + R G + + A+ + G G+ NWD +E W + + +L+V+PEE P+++T N K + E+ ++ F+ NVP + I+ + + G+++ V+D G + PI +G + +A++R G Sbjct: 8 VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNMIDAAAEKRNGDEVYTLVDSQGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGKPDMAILERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGG 186 The following BLAST results are available for this feature:
BLAST of CN185229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 473
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185229 ID=CN185229; Name=CN185229; organism=Citrus sinensis; type=EST; length=656bpback to top |