CN185229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP6_YARLI (Actin-like protein ARP6 OS=Yarrowia lipolytica GN=ARP6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11 Identity = 50/187 (26.74%), Postives = 86/187 (45.99%), Query Frame = 3 Query: 111 LVCDNGTGMVKAGFAGD-DAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL--KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG--IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 ++ DNG+ +K+ GD + P A+ I GR K YVG + + +L K P E G + NWD + +W + FYN + +LLT+ PL + Q++FE + + A L ++SG+ +V+D+G +H P+ G I R+++ G+ +T+ L Sbjct: 1 MILDNGSYAIKSDRTGDAETPNAL---IRGR-----------DKTVYVGQDLTKCKDYASLVFKRPSEKGQLINWDIQKAVWDNLFYNPQTGVDTDSSLLLTQYPLTLPQVSANIDQVVFEEYGFEQYHRTEAANLVAWSSGQCLDACLVVDAGFNATHVTPVLFGQVHEPGIRRVNVGGKTMTNLL 173
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP6_ASPFU (Actin-like protein arp6 OS=Aspergillus fumigatus GN=arp6 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11 Identity = 59/231 (25.54%), Postives = 103/231 (44.59%), Query Frame = 3 Query: 87 ADAEDIQPL-----VCDNGTGMVKAGFAGDDAPR----------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRV--------APEEHPVLLTEAPLNPKANREKMTQIMFETFN-------VPAMYVAIQAVLSLYA-----------SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 A A +Q L + DNG +KAG+A P + P+ + + R + +G Q ++ V D + + + P+E G + NW+ ++IW + F++E V +PE+ ++LTEAP ++ +I+ E + V + A V SL+ S + +V+DSG + P+Y+G + AI RLD+ G+ LT+ L Sbjct: 12 ASAPKVQSLPEKTFIIDNGAYTLKAGYAPGFPPPEDLGQALSACSTIPNAIAKTRGNRIYIG-AQLNSQVTDWNE-----MVFRRPVEKGYIVNWEAQKEIWDNAFFDEKTVRSKDLRIESPEDTTLVLTEAPNALPTLQKNADEIVMEEWGFGGYVRFVGPVLNAWNEVQSLFGDPIGQDSSSPISPKQCLLVVDSGYSHTTVTPVYKGQPIQRAIRRLDIGGKHLTNYL 236
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11 Identity = 49/198 (24.75%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 111 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-----------GVMVGMGQK---DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL--YASGR---TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 635 LV DNG+ + G+ P F +++ +PR G + + + VG++ + + LK P E I++NW+ E+I+ + F ++ E+ +P++LTEA NP R+ M++++FE + +PA+ I A+ S Y + R + +++ G +H +P+ G + RL++ G Sbjct: 8 LVIDNGSYECRVGWNNTKEPALRFRNVLTKPRKDRKKEAIPDTTDGAPTPVAAEVPAEIQVGNDITNIEAVRAHLKSPFERNIITNWNHQEQIFDYIF-TKMGFEGEQSIANPIVLTEALANPNFCRQNMSELLFECYGIPAVSYGIDALYSWEHYQNRRKKVSDALIISLGYSTTHVIPVLNGKLQLQHVRRLNVGG 204 The following BLAST results are available for this feature:
BLAST of CN185229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 473
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185229 ID=CN185229; Name=CN185229; organism=Citrus sinensis; type=EST; length=656bpback to top |