CN185226

Overview
NameCN185226
Unique NameCN185226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185226_ssr29 microsatellite CN185226_ssr29:29..46. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1220 contig Csv1_Contig1220:190..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK7_ARATH (Probable serine/threonine-protein kinase WNK7 OS=Arabidopsis thaliana GN=WNK7 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.732e-58
Identity = 103/156 (66.03%), Postives = 133/156 (85.26%), Query Frame = 3
Query:  210 IETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            +E DP  RY  ++EV+GKGA KTV+K  DEV G+EVAWNQVR+++L++SPD L+RLYSEV LL +LKH +IIRFY SWID   KT N ITE+FTSG+LR+YRKK+R+V+++A+K WARQIL GL YLHS+DPP+IHRD+KCDNIF++G+ G+VKIG
Sbjct:   19 LEIDPTCRYIRYKEVIGKGASKTVFKGFDEVDGIEVAWNQVRIDDLLQSPDCLERLYSEVRLLKSLKHKNIIRFYNSWIDDKNKTVNIITELFTSGSLRQYRKKHRKVNMKAVKCWARQILTGLKYLHSQDPPIIHRDIKCDNIFINGNHGEVKIG 174          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK6_ARATH (Probable serine/threonine-protein kinase WNK6 OS=Arabidopsis thaliana GN=WNK6 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.954e-58
Identity = 102/156 (65.38%), Postives = 134/156 (85.90%), Query Frame = 3
Query:  210 IETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            +E DP  RY  ++EV+GKGA KTVYKA DEV G+EVAWNQVR++++++SP+ L+RLYSEV LL +LKH++IIRFY SWID   KT N ITE+FTSG+LR YRKK+R+V+++A+K+WARQIL GL YLH ++PP+IHRDLKCDNIF++G+ G+VKIG
Sbjct:   19 LEVDPTFRYIRYKEVIGKGAFKTVYKAFDEVDGIEVAWNQVRIDDVLQSPNCLERLYSEVRLLKSLKHNNIIRFYNSWIDDKNKTVNIITELFTSGSLRHYRKKHRKVNMKAVKNWARQILMGLRYLHGQEPPIIHRDLKCDNIFINGNHGEVKIG 174          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK8_ORYSJ (Probable serine/threonine-protein kinase WNK8 OS=Oryza sativa subsp. japonica GN=WNK8 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58
Identity = 104/158 (65.82%), Postives = 129/158 (81.65%), Query Frame = 3
Query:  204 GYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            GY+ETDP GRYG   EVLGKGAMKTVY+  DE+ GVEVAWNQ  +++++R+PD L R+Y+EV LL+ L+HD+II F+ SW+   ++TFNFITE+F+SGTLR YR +Y RV  RA+ +WAR IL+GL YLHSR   VIHRDLKCDNIFV+GHLGQVKIG
Sbjct:   24 GYVETDPTGRYGRLSEVLGKGAMKTVYRGFDELRGVEVAWNQATISDVLRTPDALHRMYAEVSLLADLRHDAIIAFHASWVHPSRRTFNFITELFSSGTLRSYRLRYPRVSRRAVAAWARAILRGLAYLHSRG--VIHRDLKCDNIFVNGHLGQVKIG 179          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK8_ARATH (Serine/threonine-protein kinase WNK8 OS=Arabidopsis thaliana GN=WNK8 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.915e-57
Identity = 102/157 (64.97%), Postives = 131/157 (83.44%), Query Frame = 3
Query:  207 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            + E DP+GRY  +++VLG+GA KTVYKA DEV G+EVAWN V + ++M+ P  L+RLYSEVHLL  LKH++II+ + SW+D   KT N ITE+FTSG+LR YRKK+R+VD +AIK+WARQIL+GL YLHS++PPVIHRDLKCDNIFV+G+ G+VKIG
Sbjct:   19 FAEKDPSGRYIRYDDVLGRGAFKTVYKAFDEVDGIEVAWNLVSIEDVMQMPGQLERLYSEVHLLKALKHENIIKLFYSWVDEKNKTINMITELFTSGSLRVYRKKHRKVDPKAIKNWARQILKGLNYLHSQNPPVIHRDLKCDNIFVNGNTGEVKIG 175          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK7_ORYSJ (Probable serine/threonine-protein kinase WNK7 OS=Oryza sativa subsp. japonica GN=WNK7 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 1.915e-57
Identity = 103/158 (65.19%), Postives = 129/158 (81.65%), Query Frame = 3
Query:  204 GYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            GY+ETDP GRYG   EVLGKGAMKTVY+  DE+ GVEVAWNQ  +++++R+PD L R+Y+EV LL+ L+HD+II F+ SW+   ++TFNFITE+F+SGTLR YR +Y RV  RA+ +WAR IL+GL YLH+R   VIHRDLKCDNIFV+GHLGQVKIG
Sbjct:   24 GYVETDPTGRYGRLSEVLGKGAMKTVYRGFDELRGVEVAWNQATISDVLRTPDALHRMYAEVSLLADLRHDAIIAFHASWVHPSRRTFNFITELFSSGTLRSYRLRYPRVSRRAVAAWARAILRGLAYLHARG--VIHRDLKCDNIFVNGHLGQVKIG 179          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK10_ARATH (Probable serine/threonine-protein kinase WNK10 OS=Arabidopsis thaliana GN=WNK10 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.162e-54
Identity = 97/157 (61.78%), Postives = 128/157 (81.53%), Query Frame = 3
Query:  207 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            +++ DP GRY  + +VLG+GA KTVYKA DEV G+EVAWN + + ++++ P  L RLYSEVHLL++LKHD+II+ + SW+D   K+ N ITE+FTSG+L  YRKK+R+VD +AI +WARQIL+GL YLHS+ PPVIHRDLKCDNIFV+G+ G+VKIG
Sbjct:    6 FVQKDPTGRYIRYNDVLGRGAFKTVYKAFDEVEGIEVAWNLMSIEDVLQMPGQLDRLYSEVHLLNSLKHDNIIKLFYSWVDDHNKSINMITELFTSGSLTLYRKKHRKVDPKAIMNWARQILKGLHYLHSQTPPVIHRDLKCDNIFVNGNTGKVKIG 162          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK3_ORYSJ (Probable serine/threonine-protein kinase WNK3 OS=Oryza sativa subsp. japonica GN=WNK3 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.415e-54
Identity = 94/168 (55.95%), Postives = 122/168 (72.62%), Query Frame = 3
Query:  174 GAGDEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            G G    A  GY E DP GRYG F E+LGKG+ K VY+  DE  GVEVAWNQVRL +++R   +L+R Y EVHLL+ L+H  I+R +  W+D  ++  NF+TE+F SGTLR+YR+++RRV   A++ W  QIL GL YLH+  PP+IHRDLKCDNIFV+G+ G+VKIG
Sbjct:   13 GHGVLLLAEAGYAEVDPTGRYGRFNEILGKGSSKIVYRGFDEWRGVEVAWNQVRLRDVVRGGGELERFYGEVHLLAALRHRGIVRLHAYWVDAPRRALNFVTELFVSGTLRQYRERHRRVSAAAVRRWCAQILDGLAYLHAHSPPIIHRDLKCDNIFVNGNQGEVKIG 180          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK6_ORYSJ (Probable serine/threonine-protein kinase WNK6 OS=Oryza sativa subsp. japonica GN=WNK6 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.051e-50
Identity = 88/156 (56.41%), Postives = 123/156 (78.85%), Query Frame = 3
Query:  213 ETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNE-LMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            E DP GRY  + E++G G+ KTVYKA D V G+EVAW +V +NE +M S  +LQRL +E+ LL +L+H  I++ Y SW+D +++T N +TE+FTSG LREYR K+++VD++A++ WA+QIL GL YLHS+ PP+IHRDLKCDNIF++G+ G+VKIG
Sbjct:   27 EADPTGRYLRYREIIGSGSSKTVYKAFDAVDGIEVAWGKVEINERIMGSSKELQRLRTEIQLLKSLQHKHILKLYASWVDTNRRTVNIVTELFTSGNLREYRTKHKKVDMKAMRRWAKQILTGLEYLHSQKPPIIHRDLKCDNIFINGNHGKVKIG 182          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK11_ARATH (Probable serine/threonine-protein kinase WNK11 OS=Arabidopsis thaliana GN=WNK11 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.526e-49
Identity = 91/157 (57.96%), Postives = 115/157 (73.25%), Query Frame = 3
Query:  207 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            ++E DP GRYG + E+LG GA+K VY+A D+  G+EVAWNQV+L      P   +RLYSEV LL  LK+ +II  Y  W D    T NFITE+ TSG LREYRKK+R V +RA+K W++QIL+GL YLH+ DP +IHRDL C NIFV+G++GQVKIG
Sbjct:   21 FVEVDPTGRYGRYGELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRCFSDDPAMTERLYSEVRLLKNLKNSNIITLYKVWRDERNNTLNFITEICTSGNLREYRKKHRHVSMRALKKWSKQILKGLDYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIG 177          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK9_ORYSJ (Probable serine/threonine-protein kinase WNK9 OS=Oryza sativa subsp. japonica GN=WNK9 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.620e-48
Identity = 88/166 (53.01%), Postives = 130/166 (78.31%), Query Frame = 3
Query:  183 DEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNE-LMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            DE     GY+E DP GR+  ++E++G GA+KTVYKA D++ GVEVAW+Q R+++ +M S   +++L +E+ LL TLKH +I + + SW+D ++KT N ITE+FTSG+L +YR+K+++V+++A+K WA QIL GL YLHS+ P +IHRDLKCDNIF++G+ G+VKIG
Sbjct:   14 DEDGDEEGYVEADPAGRFIRYDEIVGSGAVKTVYKAFDKLEGVEVAWSQSRIDDSVMGSSKKMKQLNTEIQLLKTLKHKNIEKMFASWVDGEKKTVNIITELFTSGSLTQYRRKHKKVNMKAMKRWAIQILTGLEYLHSQKPAIIHRDLKCDNIFINGNHGKVKIG 179          
The following BLAST results are available for this feature:
BLAST of CN185226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
WNK7_ARATH1.732e-5866.03Probable serine/threonine-protein kinase WNK7 OS=A... [more]
WNK6_ARATH2.954e-5865.38Probable serine/threonine-protein kinase WNK6 OS=A... [more]
WNK8_ORYSJ8.596e-5865.82Probable serine/threonine-protein kinase WNK8 OS=O... [more]
WNK8_ARATH1.915e-5764.97Serine/threonine-protein kinase WNK8 OS=Arabidopsi... [more]
WNK7_ORYSJ1.915e-5765.19Probable serine/threonine-protein kinase WNK7 OS=O... [more]
WNK10_ARATH1.162e-5461.78Probable serine/threonine-protein kinase WNK10 OS=... [more]
WNK3_ORYSJ4.415e-5455.95Probable serine/threonine-protein kinase WNK3 OS=O... [more]
WNK6_ORYSJ5.051e-5056.41Probable serine/threonine-protein kinase WNK6 OS=O... [more]
WNK11_ARATH9.526e-4957.96Probable serine/threonine-protein kinase WNK11 OS=... [more]
WNK9_ORYSJ3.620e-4853.01Probable serine/threonine-protein kinase WNK9 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001A04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185226 ID=CN185226; Name=CN185226; organism=Citrus sinensis; type=EST; length=678bp
AGTGACTCTTTAATTATTTCATCTAATCTATATATATATATATATAGCTT
TTTGAGTTTGAATTTTCAAGTTTTCATTATTTATTTCCCCTTGCAAGTCT
TAAGATTTTGGCAACTGGGAAACAAAGTTTGTACTTGAAGATAAACAATA
TGTACAGCAATAAACAACTTGCAGGGGCTGGTGATGAAGCTAAGGCCCAT
ATTGGATACATTGAAACAGATCCTAATGGTCGCTATGGTCTTTTTGAAGA
GGTTCTTGGCAAAGGAGCAATGAAAACAGTGTACAAGGCAATTGATGAAG
TTCTTGGAGTGGAGGTGGCATGGAACCAAGTAAGGCTTAATGAGTTGATG
CGTTCACCAGATGATTTGCAGCGGCTGTACTCAGAAGTTCACCTCCTCAG
CACTCTCAAACACGATTCCATCATTCGATTCTACACCTCTTGGATTGATG
TAGATCAAAAGACATTCAACTTCATCACTGAAATGTTTACTTCAGGCACT
CTCAGAGAATACAGGAAAAAATATAGGAGGGTAGACATTCGGGCCATTAA
GAGTTGGGCGCGGCAAATCTTGCAAGGCCTTGTATATCTGCATAGCCGTG
ACCCTCCAGTAATTCATAGAGACCTCAAGTGTGATAACATCTTTGTCCAT
GGCCATCTTGGGCAAGTCAAGATTGGTG
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