DC887726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIOM_BOVIN (Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 2.274e-11 Identity = 28/86 (32.56%), Postives = 52/86 (60.47%), Query Frame = -2 Query: 184 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 441 PV+V+F A WCGPC+++ P ++++ + GK+ KV+ D+ +A Y + ++PTV+ KNG+ D +G + L ++K + Sbjct: 80 PVVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDIDDHTDLALEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 165
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.970e-11 Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = -2 Query: 190 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 438 V+++F A WCGPCR I P+ E +K++ G + KV+ DE +A +Y + ++PT + K+G + D V+GA K L +I K Sbjct: 31 VIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGA-RKDDLQNTIVK 111
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.970e-11 Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = -2 Query: 190 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 438 V+++F A WCGPCR I P+ E +K++ G + KV+ DE +A +Y + ++PT + K+G + D V+GA K L +I K Sbjct: 31 VIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGA-RKDDLQNTIVK 111
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.970e-11 Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = -2 Query: 184 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 438 V+V+F A WCGPCR I P +L+K+ L KV+TDE S+A+ + I+++PT M K G+ D V+GA K L ++I K L Sbjct: 31 VVVDFTASWCGPCRFIAPFFADLAKKLPNVL-FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGA-KKDELQSTIAKHL 113
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_EMENI (Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.970e-11 Identity = 28/73 (38.36%), Postives = 48/73 (65.75%), Query Frame = -2 Query: 220 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVP 438 V+V+ +A WCGPC+ I P +++ ++ Y Y+++ DE +A GIR++PT ++FK+G+K V+GA P Sbjct: 27 VVVDCFATWCGPCKAIAPTVEKFAQTYTDA-SFYQIDVDELSEVAAELGIRAMPTFLLFKDGQKVSDVVGANP 98
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: TRX2_SCHPO (Thioredoxin-2, mitochondrial OS=Schizosaccharomyces pombe GN=trx2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.067e-11 Identity = 30/83 (36.14%), Postives = 56/83 (67.47%), Query Frame = -2 Query: 187 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKF 435 +V+F+A WCGPC+ + P +++LS+Q K VN D+ IA + G+ ++PT+++F+ G++ D ++GA K TL++ + K+ Sbjct: 39 VVDFYADWCGPCKYLKPFLEKLSEQN-QKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVGADVK-TLSSLLAKY 119
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.617e-11 Identity = 29/74 (39.19%), Postives = 48/74 (64.86%), Query Frame = -2 Query: 214 VEFWAPWCGPCRMIHPIIDELSKQYVG-KLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKS 432 V+ +A WCGPC+ I P+ +L+ +Y K KVN DE IA+ G++++PT + F+NG++ D + GA P++ Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQA 97
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 8.643e-11 Identity = 29/83 (34.94%), Postives = 55/83 (66.27%), Query Frame = -2 Query: 190 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 438 ++++F A WC PCR I P+ +L+K+++ + +KV+ DE ++A + ++++PT + K GE K+TV+GA K + ++EK Sbjct: 30 IVIDFTATWCPPCRFIAPVFADLAKKHLDVV-FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAA-KEEIIANLEK 110 The following BLAST results are available for this feature:
BLAST of DC887726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887726 ID=DC887726; Name=DC887726; organism=Citrus sinensis; type=EST; length=442bpback to top |