DC887726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_RICCN (Thioredoxin OS=Rickettsia conorii GN=trxA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.242e-25 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = -2 Query: 190 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 441 PVLV+FWA WCGPC+M+ PIIDE+SK+ GK+K K+N DE+P+ + YGIRSIPT+M+FKNGE+KDT IG K++L I K Sbjct: 20 PVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPNTPSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_RICPR (Thioredoxin OS=Rickettsia prowazekii GN=trxA PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.343e-24 Identity = 49/84 (58.33%), Postives = 64/84 (76.19%), Query Frame = -2 Query: 190 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 441 PV+V+FWA WCGPC+M+ PIIDE+SK+ K+K K+N DE+P + YGIRSIPT+M+FKNGE+KDT IG K++L I K Sbjct: 20 PVMVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_RICTY (Thioredoxin OS=Rickettsia typhi GN=trxA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.996e-24 Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = -2 Query: 190 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 441 PV+V+FWA WCGPC+M+ PIIDE+SK+ K+K K+N DE+P + YG+RSIPT+M+FKNGE+KDT IG K +L I K Sbjct: 20 PVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYGVRSIPTIMLFKNGEQKDTKIGLQQKKSLLDWINK 103
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_RICBR (Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 5.219e-24 Identity = 48/78 (61.54%), Postives = 62/78 (79.49%), Query Frame = -2 Query: 208 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 441 PVLV+FWA WC PCRM+ PII+E+SK K+K K+N DE+P I ++YGIRSIPTVM+FKNGE+KDT +G K++L Sbjct: 20 PVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPEIPSKYGIRSIPTVMLFKNGEQKDTKVGLHQKNSL 97
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: TRXM3_ARATH (Thioredoxin M-type 3, chloroplastic OS=Arabidopsis thaliana GN=At2g15570 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 3.383e-23 Identity = 43/86 (50.00%), Postives = 63/86 (73.26%), Query Frame = -2 Query: 184 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 441 PVLVEF+ WCGPCRM+H IIDE++ Y GKL CY +N D +A Y I+++P V++FKNGEK+++++G +PK ++IE+ L Sbjct: 86 PVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_STRAU (Thioredoxin (Fragment) OS=Streptomyces aureofaciens GN=trxA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.770e-23 Identity = 44/86 (51.16%), Postives = 64/86 (74.42%), Query Frame = -2 Query: 184 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 441 PVLV F PWCGPC+M+ P++DE++ +Y GK+K KVNTDE+P +A++YG+RSIPT ++FK GE ++GA PK+ L ++ L Sbjct: 21 PVLVHFEGPWCGPCKMVAPVLDEIANEYEGKVKVAKVNTDENPQLASQYGVRSIPTRLMFKGGEVAANMVGAAPKTRLAAFLDASL 106
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_PASMU (Thioredoxin OS=Pasteurella multocida GN=trxA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.285e-22 Identity = 43/84 (51.19%), Postives = 64/84 (76.19%), Query Frame = -2 Query: 190 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 441 PVL++FWAPWCGPCRMI PI+DE++ ++ GK+K K+N DE+ + + G+RSIPT+++FKNG+ T +GA+PK+ L I + Sbjct: 21 PVLLDFWAPWCGPCRMISPILDEIAAEFSGKVKVVKINIDENQATPAQLGVRSIPTLVLFKNGKAVATQVGALPKNQLANFINQ 104
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_HAEIN (Thioredoxin OS=Haemophilus influenzae GN=trxA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 6.380e-22 Identity = 39/86 (45.35%), Postives = 65/86 (75.58%), Query Frame = -2 Query: 184 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 441 P+L++FWAPWCGPC+MI P++DEL+ ++ GK+K K+N D++ + ++G+RSIPT+++ KNG+ T +GA+PK+ L I + + Sbjct: 22 PILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVDDNQATPAQFGVRSIPTLLLIKNGQVVATQVGALPKTQLANFINQHI 107
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO1_CORNE (Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 8.332e-22 Identity = 42/83 (50.60%), Postives = 63/83 (75.90%), Query Frame = -2 Query: 193 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIE 441 PV+V+FWA WCGPC+MI P +DE++ + G++K KVN DE+P +A ++G+RSIPT+++FK+GE ++GA PKS L I+ Sbjct: 20 PVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPELAAQFGVRSIPTLLMFKDGELAANMVGAAPKSRLADWIK 102
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_RHOSH (Thioredoxin OS=Rhodobacter sphaeroides GN=trxA PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 1.421e-21 Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = -2 Query: 184 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 441 PV+V+FWA WCGPCR I P ++ELSK+Y GK+K KVN DE+P G+R IP + +FKNG+ +GA PK+ L T I L Sbjct: 21 PVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNVDENPESPAMLGVRGIPALFLFKNGQVVSNKVGAAPKAALATWIASAL 106 The following BLAST results are available for this feature:
BLAST of DC887726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887726 ID=DC887726; Name=DC887726; organism=Citrus sinensis; type=EST; length=442bpback to top |