DC887726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_CHRVI (Thioredoxin OS=Chromatium vinosum GN=trxA PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.421e-21 Identity = 42/83 (50.60%), Postives = 60/83 (72.29%), Query Frame = -2 Query: 193 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIE 441 PVLV++WA WCGPC+M P+ DE++ +Y G++K K N DE+P+ RYG R IPT+M+F+ GE + T +GAV KS LT ++ Sbjct: 22 PVLVDYWADWCGPCKMXAPVXDEIADEYAGRVKXAKXNXDENPNTPPRYGXRGIPTLMLFRGGEVEATKVGAVSKSQLTAFLD 104
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_SHIFL (Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 3.166e-21 Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = -2 Query: 208 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 438 +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A +YGIR IPT+++FKNGE T +GA+ K L Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQL 100
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_SALTY (Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 3.166e-21 Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = -2 Query: 208 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 438 +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A +YGIR IPT+++FKNGE T +GA+ K L Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQL 100
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_SALTI (Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 3.166e-21 Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = -2 Query: 208 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 438 +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A +YGIR IPT+++FKNGE T +GA+ K L Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQL 100
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_PSEAE (Thioredoxin OS=Pseudomonas aeruginosa GN=trxA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.166e-21 Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = -2 Query: 193 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIE 441 PVLV++WA WCGPC+MI P++DE+++ Y GKLK K+N DE+ +YG+R IPT+M+FK+G + T +GA+ KS L ++ Sbjct: 23 PVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLNIDENQDTPPKYGVRGIPTLMLFKDGNVEATKVGALSKSQLAAFLD 105
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_ECOLI (Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 3.166e-21 Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = -2 Query: 208 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 438 +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A +YGIR IPT+++FKNGE T +GA+ K L Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQL 100
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_ECOL6 (Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 3.166e-21 Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = -2 Query: 208 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 438 +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A +YGIR IPT+++FKNGE T +GA+ K L Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQL 100
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_ECO57 (Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 3.166e-21 Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = -2 Query: 208 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 438 +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A +YGIR IPT+++FKNGE T +GA+ K L Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQL 100
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_CHLLT (Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA PE=1 SV=5) HSP 1 Score: 100.138 bits (248), Expect = 4.135e-21 Identity = 42/85 (49.41%), Postives = 63/85 (74.12%), Query Frame = -2 Query: 184 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 438 VLV+FWA WCGPC M+ P+I++L+ Y GK K+N DE+P+IA +YGIRSIPT++I K G+ D ++GA+PK+ + I++ + Sbjct: 23 VLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKIDEHI 107
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_HELPY (Thioredoxin OS=Helicobacter pylori GN=trxA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 9.212e-21 Identity = 42/84 (50.00%), Postives = 58/84 (69.05%), Query Frame = -2 Query: 184 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 435 LV+FWAPWCGPC+M+ P+IDEL+ +Y GK K KVNTDE ++ ++GIRSIPT++ K+GE ++G K L + K L Sbjct: 22 LVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLL 105 The following BLAST results are available for this feature:
BLAST of DC887726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887726 ID=DC887726; Name=DC887726; organism=Citrus sinensis; type=EST; length=442bpback to top |