DC887726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_LISIN (Thioredoxin OS=Listeria innocua GN=trxA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.623e-17 Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = -2 Query: 184 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 438 VL +FWA WCGPCRM+ P+++E+ ++ LK K++ DE+P +G+ SIPT++I K+GE +T+IG PK L I K++ Sbjct: 19 VLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV 103
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_BUCBP (Thioredoxin OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trxA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.731e-17 Identity = 36/85 (42.35%), Postives = 58/85 (68.24%), Query Frame = -2 Query: 184 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 438 VLV+FWA WC PC+++ PI+++++K+Y KL K+N D++P+ A +Y IR IP +++FKN E T +GA+ K L + +L Sbjct: 24 VLVDFWAEWCNPCKILAPILEDIAKEYEHKLIVTKINIDKNPNTAPKYSIRGIPALLLFKNSELVGTKVGALSKVQLKDFLNLYL 108
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_BUCAI (Thioredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trxA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.054e-16 Identity = 37/82 (45.12%), Postives = 57/82 (69.51%), Query Frame = -2 Query: 190 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 435 LV+FWA WC PC+++ PI++E+SK+Y K+ K+N +E+P+ A Y IRSIPT+++F N E T +GAV K L +++ Sbjct: 24 LVDFWAQWCNPCKILAPILEEISKEYSNKVIVGKLNIEENPNTAPVYSIRSIPTLLLFNNSEVLATKVGAVSKLELKEFLDE 105
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO1_CHLTE (Thioredoxin-1 OS=Chlorobium tepidum GN=trx1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.832e-16 Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = -2 Query: 190 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 441 PV ++FWA WCGPC+M+ P + +L+ ++ G+L KVN D+ P A R+ ++ IP +M+F G+ K GA+P + + K Sbjct: 15 PVFIDFWADWCGPCKMVAPSVKQLASEFKGRLIVVKVNVDQQPDAAARFQVQGIPALMLFVGGQLKWRTAGAIPYQQMRQEVLK 98
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_TREPA (Thioredoxin OS=Treponema pallidum GN=trxA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.923e-16 Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = -2 Query: 190 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 438 V+V+FWAPWCG C+M+ P+++E+ + + K+N D+ +A + + SIPT+++FK+G++ D IG V KS + T I+K Sbjct: 21 VIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVDDDQDLAVEFNVASIPTLIVFKDGKEVDRSIGFVDKSKILTLIQK 103
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_BUCAP (Thioredoxin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trxA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.554e-15 Identity = 32/83 (38.55%), Postives = 56/83 (67.47%), Query Frame = -2 Query: 190 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 438 VLV+FWA WC PC+++ PI++E++++Y K+K K+N +++P+ A Y IR IP +++F E T +GA+ K L +++ Sbjct: 23 VLVDFWAEWCNPCKILAPILEEIAQEYFNKIKVGKLNIEKNPNTAPIYSIRGIPALLLFHGREVLATKVGAISKLQLKDFLDE 105
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: TRXB_MYCLE (Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium leprae GN=trxB/A PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 9.865e-15 Identity = 30/78 (38.46%), Postives = 54/78 (69.23%), Query Frame = -2 Query: 208 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 441 PVLV+FWA WCGPC+M+ P+++E++ + +L K++ D +P +A + + SIPT+++F+ G+ ++GA K+ L Sbjct: 369 PVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVDTNPEMAREFQVVSIPTMILFQGGQPVKRIVGAKGKAAL 446
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_MYCTU (Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 9.865e-15 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = -2 Query: 208 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 441 PVLV+FWA WCGPC+M+ P+++E++ + L K++ D +P A + + SIPT+++FK+G+ ++GA K+ L Sbjct: 27 PVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL 104
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO_MYCBO (Thioredoxin OS=Mycobacterium bovis GN=trxA PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 9.865e-15 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = -2 Query: 208 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 441 PVLV+FWA WCGPC+M+ P+++E++ + L K++ D +P A + + SIPT+++FK+G+ ++GA K+ L Sbjct: 27 PVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL 104
BLAST of DC887726 vs. ExPASy Swiss-Prot
Match: THIO1_SYNY3 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803) GN=slr0233 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.683e-14 Identity = 32/86 (37.21%), Postives = 59/86 (68.60%), Query Frame = -2 Query: 184 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 441 PVLV+F+A WCGPC+M+ PI++++ +++ K++TD+ P+IAT+Y I+S+PT+++FK G+ + G + L ++ F+ Sbjct: 20 PVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKYPAIATQYQIQSLPTLVLFKQGQPVHRMEGVQQAAQLIQQLQVFV 105 The following BLAST results are available for this feature:
BLAST of DC887726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887726 ID=DC887726; Name=DC887726; organism=Citrus sinensis; type=EST; length=442bpback to top |