DC887721
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_CENSY (30S ribosomal protein S19P OS=Cenarchaeum symbiosum GN=rps19p PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.613e-22 Identity = 50/113 (44.25%), Postives = 76/113 (67.26%), Query Frame = -3 Query: 194 LAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 532 L +LF++R RR RG+ LI++++ A+ G++ P++THLR++I++P M G + V++GK F VEI EMIGHYL E+ I+ K V HG PG+GA+ SS ++PLK Sbjct: 23 LFRLFNSRQRRSLTRGITDGKRKLIREIKDARA----GKEGNPIKTHLRDLIVLPSMTGVTVNVFSGKEFRPVEITTEMIGHYLGEYVITNKRVSHGAPGVGASRSSLYVPLK 131
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_THEVO (30S ribosomal protein S19P OS=Thermoplasma volcanium GN=rps19p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.751e-22 Identity = 52/113 (46.02%), Postives = 75/113 (66.37%), Query Frame = -3 Query: 194 LAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 532 L K+ ARARR R + L++KL G+ + ++TH+R++II+P +G I+ VYNG ++++ EIKPEMIGHYL EF ++ K VKH PG+GAT SS+F+PLK Sbjct: 48 LIKILPARARRSLSREMNHDQKKLVEKLE--------GDYDD-IKTHVRDVIILPSYVGKIVEVYNGNSYSKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_PICTO (30S ribosomal protein S19P OS=Picrophilus torridus GN=rps19p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.751e-22 Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = -3 Query: 194 LAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 532 L L ARARR + R + + L +KL G+K E ++TH+R++I++P+ +G I +YNG ++ + EIKPEMIGHYL EF+++ K VKH PG+GAT SS+F+PLK Sbjct: 48 LLPLLPARARRSYSRQMNHEQEKLYEKLL--------GDK-ENIKTHVRDLIVLPQFVGKTIELYNGNSYIKFEIKPEMIGHYLGEFALTRKEVKHSGPGVGATRSSKFLPLK 151
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_CALMQ (30S ribosomal protein S19P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps19p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.751e-22 Identity = 59/111 (53.15%), Postives = 73/111 (65.77%), Query Frame = -3 Query: 194 KLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 526 KL AR RR +RGL+ L++K+RKAK A G K PVRTH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+I+ K V+HG PG+ AT S+ I K Sbjct: 78 KLLPARQRRTLKRGLRPCHRQLLEKIRKAKAFAAKG-KSIPVRTHCRDMIILPEMVGLTIFVYNGITYIPVPISPWHIGHYLGEFAITTKIVQHGEPGLKATKSTLHIAAK 187
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_METTP (30S ribosomal protein S19P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps19p PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.592e-22 Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = -3 Query: 194 LAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 532 +A+L +R RR +RGL ++ + KLR A+ A +THLR+ I++PEM+G ++ ++NGKTF +VEI PEMIGHYL E++++ V HG G+GAT SS+F+PLK Sbjct: 34 IAELLPSRQRRTLRRGLSKEHRKFMAKLR-ARGTA---------KTHLRDAIVLPEMVGKVVEIHNGKTFQRVEIIPEMIGHYLGEYALTRARVIHGAAGVGATRSSKFVPLK 136
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_PYRIL (30S ribosomal protein S19P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps19p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.692e-22 Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = -3 Query: 194 KLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 526 KL AR RR +RGLK + L++K+RKAK+ G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+I+ K V+HG PG+ AT SS I K Sbjct: 51 KLLPARQRRSLKRGLKPEHRKLLEKIRKAKKLMAQGKKVV-IKTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFAITTKIVQHGEPGLKATRSSLHIAAK 160
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_PYRCJ (30S ribosomal protein S19P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps19p PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.128e-22 Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = -3 Query: 194 KLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 526 KL AR RR +RGLK + L++K+RKAKR G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ + V+HG PG+ AT SS I K Sbjct: 49 KLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLMAQGKKVT-IKTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTRIVQHGEPGLKATRSSLHIAAK 158
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_THEAC (30S ribosomal protein S19P OS=Thermoplasma acidophilum GN=rps19p PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.045e-21 Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = -3 Query: 194 LAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 532 L K+ ARARR R + L++KL + E V+TH+R++II+P +G I+ VYNG ++ + EIKPEMIGHYL EF ++ K VKH PG+GAT SS+F+PLK Sbjct: 48 LIKILPARARRTLLREPNYEQKKLMEKLESDE---------EDVKTHVRDVIILPNYVGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_NANEQ (30S ribosomal protein S19P OS=Nanoarchaeum equitans GN=rps19p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.365e-21 Identity = 57/113 (50.44%), Postives = 69/113 (61.06%), Query Frame = -3 Query: 194 LAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 532 LAK+ AR RR R LK KKL K A G+ +P++TH RN II+P M+G + VYNGK + V+IKPEMIGHYL EFS + K KH PGIGAT SS + K Sbjct: 28 LAKIMPARQRRTLLRRLKFGWSDQQKKLFKKILLAKEGKYKKPIKTHARNTIILPFMVGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPGIGATRSSAHVSKK 140
BLAST of DC887721 vs. ExPASy Swiss-Prot
Match: RS19_METBU (30S ribosomal protein S19P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps19p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.783e-21 Identity = 53/112 (47.32%), Postives = 68/112 (60.71%), Query Frame = -3 Query: 194 AKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 529 A+L A+ RR +RG ++++ R K E VRTH RNMII PEMIG + VYNGK F ++EI PEMIGH E+S + V HG G+GAT SS+F+PLK Sbjct: 35 AELLPAKERRSIRRGFSDSQKGVLQQFRDGK---------ESVRTHFRNMIIFPEMIGKNLEVYNGKEFVKIEIMPEMIGHRFGEYSPTRNRVSHGSAGVGATRSSKFVPLK 137 The following BLAST results are available for this feature:
BLAST of DC887721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887721 ID=DC887721; Name=DC887721; organism=Citrus sinensis; type=EST; length=534bpback to top |