DC887700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_BORPA (10 kDa chaperonin OS=Bordetella parapertussis GN=groS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11 Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = -3 Query: 101 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 373 L P +RV+V+++ KT +GI++P+ ++ K + G+V+AVGPG + ++G +PV K GD VL Y G VK+ ++ + R++EIL + Sbjct: 3 LRPLHDRVIVKRLDNERKTASGIVIPDSAAEKPDQGEVVAVGPGKKTEDGKILPVDLKAGDKVLFGKYAGQTVKVDGEELLVIREDEILAVI 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_BORBR (10 kDa chaperonin OS=Bordetella bronchiseptica GN=groS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11 Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = -3 Query: 101 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 373 L P +RV+V+++ KT +GI++P+ ++ K + G+V+AVGPG + ++G +PV K GD VL Y G VK+ ++ + R++EIL + Sbjct: 3 LRPLHDRVIVKRLDNERKTASGIVIPDSAAEKPDQGEVVAVGPGKKTEDGKILPVDLKAGDKVLFGKYAGQTVKVDGEELLVIREDEILAVI 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH101_RHOPA (10 kDa chaperonin 1 OS=Rhodopseudomonas palustris GN=groS1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11 Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RV+V++I +KT GI++P+ + K G+VIAVGPG RD+ G P+ K GD VL + G +KL ++ + ++ +I+G + Sbjct: 8 PLHDRVVVKRIDAETKTKGGIIIPDSAKEKPQEGQVIAVGPGGRDETGKLTPIDVKVGDRVLFGKWSGTEIKLDGEELLIMKESDIMGVV 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH101_BRAJA (10 kDa chaperonin 1 OS=Bradyrhizobium japonicum GN=groS1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11 Identity = 33/90 (36.67%), Postives = 54/90 (60.00%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RVLV +I KT GI++P+ + K G++IA G G R+++G IP+ K GD VL + G VK+ +DY + ++ ++LG + Sbjct: 5 PLHDRVLVRRIDAEEKTAGGIIIPDTAKEKPQEGEIIAAGSGGRNEQGQLIPIDVKPGDRVLFGKWSGTEVKIDGQDYLIMKESDLLGVV 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_TREPR (10 kDa chaperonin OS=Tremblaya princeps GN=groS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11 Identity = 31/93 (33.33%), Postives = 59/93 (63.44%), Query Frame = -3 Query: 101 RLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 376 ++ P +RV+V++ +KT GI++P+ ++ K + G V+A+GPG +D EG +P+ + GD VL Y G +K+ ++D + R+E+I+ + Sbjct: 3 KIRPLGDRVVVKRSEDETKTPCGIVIPDSAAEKQDQGTVVALGPGKKDSEGARVPMEVRLGDRVLFGKYAGQSIKVDDEDLMVMREEDIVAVI 95
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_GEOBB (10 kDa chaperonin OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=groS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11 Identity = 33/92 (35.87%), Postives = 55/92 (59.78%), Query Frame = -3 Query: 101 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 373 L P +R++V+++ + T G+ +PE + K G+V+AVG G R ++G P+ K GD VL Y G VKL +D+ + R+++ILG + Sbjct: 3 LRPLQDRIIVKRVEEATMTAGGLYIPETAKEKPQQGEVVAVGNGKRGEDGKVYPIDLKVGDKVLFGKYAGSEVKLEGEDFLIMREDDILGVV 94
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH101_RHIME (10 kDa chaperonin 1 OS=Rhizobium meliloti GN=groS1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11 Identity = 30/90 (33.33%), Postives = 54/90 (60.00%), Query Frame = -3 Query: 101 PTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 367 P +RV+V ++ KT GI++P+ + K G+++AVG GARD+ G +P+ K GD +L + G VK+ +D + ++ +I+G + Sbjct: 8 PLHDRVVVRRVESEEKTKGGIIIPDTAKEKPQEGEIVAVGSGARDESGKVVPLDVKAGDRILFGKWSGTEVKINGEDLLIMKEADIMGVI 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_RALME (10 kDa chaperonin OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 33/93 (35.48%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 98 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLH 373 L P +RV+V+++ +KT +GI++P+ ++ K + G+V+A+GPG +D +GN I + K GD VL Y G VK+ ++ + R+E+I+ ++ Sbjct: 3 LRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQGVKVDGQELLVMREEDIMAVVN 95
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_RALEJ (10 kDa chaperonin OS=Ralstonia eutropha (strain JMP134) GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 33/93 (35.48%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 98 LIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLH 373 L P +RV+V+++ +KT +GI++P+ ++ K + G+V+A+GPG +D +GN I + K GD VL Y G VK+ ++ + R+E+I+ ++ Sbjct: 3 LRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQGVKVDGQELLVMREEDIMAVVN 95
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_PROAC (10 kDa chaperonin OS=Propionibacterium acnes GN=groS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = -3 Query: 101 MAKRLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTL 385 MA + P +RVLV+ + T +G+++P+ + K GKVI+ GPG D +G +P+ KEGD V+ YGG VK ++Y L +IL + Sbjct: 1 MATTIKPLEDRVLVQPLEAEQTTASGLVIPDTAKEKPQEGKVISAGPGRVDDKGTRVPMDVKEGDVVIFSKYGGTEVKYDGQEYLLLNARDILAVV 96 The following BLAST results are available for this feature:
BLAST of DC887700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887700 ID=DC887700; Name=DC887700; organism=Citrus sinensis; type=EST; length=450bpback to top |