DC887604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497H_ARATH (UPF0497 membrane protein At3g14380 OS=Arabidopsis thaliana GN=At3g14380 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.609e-40 Identity = 81/162 (50.00%), Postives = 113/162 (69.75%), Query Frame = -2 Query: 128 NAALRTAEPIARXXXXXXXXXXXXXXLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAI-IAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAP 610 N ++AE + R +KNS +++FGS+SYS++GAF YLV ANG+CA YSLLSA+ I A+P P + Q T F LDQ++TY++LAAGAVS E +YL G++ ITWS+ C S+G FCH A+ SV+ TFV Y++LSLISSY+LF++++AP Sbjct: 17 NRTEKSAEAVLRVASMALSITGLVIMIKNSISNEFGSVSYSNIGAFMYLVSANGVCAAYSLLSALAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSYGSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4972_PICSI (UPF0497 membrane protein 2 OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.706e-37 Identity = 72/135 (53.33%), Postives = 102/135 (75.56%), Query Frame = -2 Query: 125 KNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPI 529 K+ ++ + L YS++ AFR L +ANGICAGYSL+SA + +P +S++W F LDQ +TYL+LA GAV+T+VLY+ KGD TW +CGS+G FC++A ASVII+F A+ C+++LSL+S+Y+LFSKYD PI Sbjct: 48 KSEQSDQYMQLDYSNVDAFRCLAYANGICAGYSLISAFDSMVPVSHHISRSWILFLLDQGITYLMLAGGAVATQVLYVAYKGDEKATWEQICGSYGRFCNRAGASVIISFFALVCFLLLSLLSAYRLFSKYDPPI 182
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4974_PICSI (UPF0497 membrane protein 4 OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.149e-34 Identity = 69/145 (47.59%), Postives = 102/145 (70.34%), Query Frame = -2 Query: 101 KNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMS--QAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIE 529 KN +++ +G+L YSD+G F+YLV+ANGICA YS+LS + + + S +AW F LDQ LTYLIL AG E++ L +G+ ++WS VC S+G FC+ A ASV+IT + C++VLSL+S+++LFSKY+API +G + + Sbjct: 37 KNKQSNQYGALHYSDVGGFKYLVYANGICAIYSILSLLGSVLSTGIDYSWTRAWIMFILDQALTYLILTAGVCGVEIMDLAYQGNEQVSWSRVCVSYGKFCNDARASVLITMAVLVCFMVLSLLSAHRLFSKYEAPIVNNGHHTD 181
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497G_VITVI (UPF0497 membrane protein 16 OS=Vitis vinifera GN=GSVIVT00027310001 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.179e-24 Identity = 53/140 (37.86%), Postives = 94/140 (67.14%), Query Frame = -2 Query: 101 ETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIE 520 + S +G L +S+L +Y+V +GI AGY+L+ A++A+ R +++AW FF DQ++ YL++ +GA E+LYL KGD ++WS C S+G FC + ++ + +A+ C++VL++IS+Y++FS ++ P+ S K +E Sbjct: 46 DNSIYGKLEFSNLTGLKYMVCISGISAGYALV-AVVASWVR-CLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEACSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPV--SSKEVE 181
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497B_ORYSJ (UPF0497 membrane protein Os02g02199000 OS=Oryza sativa subsp. japonica GN=Os02g0219900 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.955e-23 Identity = 51/133 (38.35%), Postives = 80/133 (60.15%), Query Frame = -2 Query: 110 FGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGK 508 +G + +SDL FRYLV N I A YS+ S ++++ + W F LDQ YL+L + + + EV+YL R+GD ++W VC FG FC A SV + A+ C++ LSLIS++++F+K++ P + K Sbjct: 57 YGEVRFSDLSGFRYLVWINAITAAYSVASILLSSCRFITRFD--WLIFLLDQASAYLLLTSASAAAEVVYLAREGDREVSWGEVCSYFGRFCGAATVSVALNAAALLCFMALSLISAFRVFTKFNPPSQSNSK 187
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497D_MAIZE (UPF0497 membrane protein 13 OS=Zea mays PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.220e-21 Identity = 50/158 (31.65%), Postives = 80/158 (50.63%), Query Frame = -2 Query: 143 GNAALRTAEPIARXXXXXXXXXXXXXXLKNSETSD-FGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFS 613 G A L+ E R N++ D +G + +SDL F YLV N + A Y++ S + ++ RP W +DQ YL++ + + + E+L L R GD ++W C FG FC KA S+ + A+AC+ LSL+S++++FS Sbjct: 2 GAAGLKVPEMALRLCVVPLSLASLWEMASNAQADDTYGEVKFSDLSGFSYLVGVNAVTAAYAVASVLASSFKRPLAARYDWVVLVMDQASAYLLVTSASAAAELLQLARHGDRGVSWGEACSYFGRFCGKATVSLALHAAALACFAALSLVSAFRVFS 159
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497A_RICCO (UPF0497 membrane protein 10 OS=Ricinus communis GN=RCOM_1302390 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.911e-21 Identity = 43/135 (31.85%), Postives = 84/135 (62.22%), Query Frame = -2 Query: 122 NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIA 526 + + S +G+L YS++ +Y+V + ICA Y+ ++A+ + +++ W FF DQ++ YL++ + A + E+LY+ GD +TWS C S+G FC+ ++I+ + + ++VL++IS+Y+ FS Y P++ Sbjct: 31 HQDNSSYGNLKYSNIMGLKYMVCISAICASYAFVAAVSIWIK--CLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSYGKFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVS 163
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4979_SOYBN (UPF0497 membrane protein 9 OS=Glycine max PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.697e-20 Identity = 46/135 (34.07%), Postives = 79/135 (58.52%), Query Frame = -2 Query: 116 ETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACS 520 + S +G L Y++L A +Y+V + +CA Y+LL+A + + +S+AW FF DQ++ YL + + A E+ YL G +WS C S+G FC K ++I+ + C+ V+++IS+++ FS +D P S Sbjct: 47 DNSSYGMLKYNNLSALKYMVLVSALCACYALLAAACSLVR--CFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAKEDSWSEACSSYGSFCSKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFVNS 179
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4977_SORBI (UPF0497 membrane protein Sb04g007720 OS=Sorghum bicolor GN=Sb04g007720 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19 Identity = 44/129 (34.11%), Postives = 78/129 (60.47%), Query Frame = -2 Query: 143 NSETSD-FGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFS 526 N++ D +G + +SDL F YLV N + A Y+L+S +++++ + W +DQ YL++ + + + E+L L R+GD ++W VC FG FC KA S+ + A+AC+V L+L+S++++ S Sbjct: 31 NAQADDTYGEVKFSDLSGFSYLVGVNAVTAAYALVSILLSSLKPLARYD--WVILVMDQASAYLLVTSASAAAELLQLARRGDREVSWGEVCSYFGRFCGKATVSLALHAAALACFVALALVSAFRVLS 157
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U49C7_ARATH (UPF0497 membrane protein At5g54980 OS=Arabidopsis thaliana GN=At5g54980 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.670e-19 Identity = 45/128 (35.16%), Postives = 79/128 (61.72%), Query Frame = -2 Query: 128 DFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAP 511 D+G+L Y+ + +Y+V + I A Y+LLS + + + +S+AW FF DQ+L Y++ + A +TE++YL KGD +TWS +C S+ +C K ++ + + ++ LS+IS+Y+ FS +D P Sbjct: 60 DYGNLEYNSIMGLKYMVGVSAISAIYALLSTVSSWVT--CLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSSYPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPP 185 The following BLAST results are available for this feature:
BLAST of DC887604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887604 ID=DC887604; Name=DC887604; organism=Citrus sinensis; type=EST; length=653bpback to top |