DC887604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497D_RICCO (UPF0497 membrane protein 13 OS=Ricinus communis GN=RCOM_1446020 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.001e-15 Identity = 41/118 (34.75%), Postives = 75/118 (63.56%), Query Frame = -2 Query: 149 YSDLGAFRYLVHANGICAGYSLLSAI-IAAMPRPST--MSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 493 YS AFR+LV AN + G+S+LS I + M R S + + + F D ++ ++++ + +T + Y+ R G+ ITW+AVC G FC++A+ S+++ ++A+ CYV L+ ++++KL Sbjct: 71 YSYSSAFRFLVGANAVVCGFSVLSLIFVCLMSRRSEAILEKNYYLFLHDMVMMVMMVSGCSAATAIGYVGRYGEKEITWTAVCDFVGKFCNQALVSIVLAYLALFCYVALTTLAAHKL 188
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4979_POPTR (UPF0497 membrane protein 9 OS=Populus trichocarpa GN=POPTRDRAFT_576556 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.491e-14 Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = -2 Query: 149 SYSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 496 SY DL F++ V A I AGY +LS I A+ RP LD + L AAGA + ++YL G+ + W A+C FG FC K +V+ +F+ V +V L ++S++ L Sbjct: 79 SYDDLPTFQFFVIAMAIVAGYLVLSLPFSIVAIVRPHAAGPRLLLIILDTVALTLNTAAGAAAAAIVYLAHNGNSSTNWLAICQQFGDFCQKNSGAVVASFITVVIFVFLLVLSAFAL 196
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4977_VITVI (UPF0497 membrane protein 7 OS=Vitis vinifera GN=GSVIVT00037922001 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.367e-14 Identity = 38/118 (32.20%), Postives = 69/118 (58.47%), Query Frame = -2 Query: 149 SLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 502 ++ YS L AF++LV A+ + G+S+LS I ++ + + +F D +L L ++A A +T V Y+ R G W AVCG+ FC KA+AS++++ + C +L+++++ L Sbjct: 65 TVRYSYLSAFKFLVGADAVVCGFSMLSLIFVSIFNKGKSNHYFFLYFHDLILMVLSMSACAAATAVGYVGRYGQDKAAWMAVCGNVKMFCDKALASILLSLIGFICLFLLTIMAARNL 182
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4975_PICSI (UPF0497 membrane protein 5 OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.367e-14 Identity = 48/136 (35.29%), Postives = 66/136 (48.53%), Query Frame = -2 Query: 101 YSDLGAFRYLVHANGICAGYSLLSAIIAAMP----RPSTMSQ-AWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIE 493 YSD+ A +LV NGI A YSLL + + P T AW F LDQ + Y LAA A + E YL +G W VC + FCH+ ++ TF+ +S +S+Y LF Y + GK+I+ Sbjct: 107 YSDMKALVFLVVMNGIVASYSLLQGLRCVLSIYTQSPLTSKPLAWLIFALDQTMAYFSLAAAAAAAESAYLAERGQTEFQWMKVCIFYEKFCHQIGEGLVSTFLVSLSMATVSGMSAYHLFRLYGS----KGKSIQ 238
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4978_POPTR (UPF0497 membrane protein 8 OS=Populus trichocarpa GN=POPTRDRAFT_763057 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13 Identity = 40/118 (33.90%), Postives = 61/118 (51.69%), Query Frame = -2 Query: 149 SYSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 496 SY DL F++ V A I GY +LS I A+ RP + LD + L AAGA + ++YL G+ W A+C +G FC K +V+ +F+ V +V L ++S++ L Sbjct: 79 SYDDLPTFQFFVIAIAIVGGYLVLSLPFSIVAIVRPHAVGPRLLLIILDAVALTLNTAAGAAAAAIVYLAHNGNSNTNWLAICQQYGDFCQKVSGAVVASFITVVIFVFLIVLSAFAL 196
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497S_ARATH (UPF0497 membrane protein At4g16442 OS=Arabidopsis thaliana GN=At4g16442 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13 Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = -2 Query: 131 YSDLGAFRYLVHANGICAGYSLLSAI---IAAMPRPSTMSQ--AWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDA 493 Y+D+ A +LV ANGI A YSLL ++ + M S+ AW FF DQ + YL +AA A + E + R+G+ + W VC +G FC++ V +A V +S IS++ LF Y A Sbjct: 48 YTDMKAVVFLVVANGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLYGA 173
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497E_RICCO (UPF0497 membrane protein 14 OS=Ricinus communis GN=RCOM_0864260 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13 Identity = 42/126 (33.33%), Postives = 64/126 (50.79%), Query Frame = -2 Query: 131 YSDLGAFRYLVHANGICAGYSLLSAI--IAAMPRPSTMSQ---AWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDA 493 ++D+ A +LV ANGI A YSLL + + M R S + AW F DQ++ YL +AA A + + + G + W +C +G FC++ + + VVLS IS++ LF Y A Sbjct: 68 FTDMKALVFLVIANGIAAAYSLLQGVRCVVGMVRGSALFSKPLAWAIFSGDQMMAYLTVAAVAAAAQSAVFAKLGQPELQWMKICNMYGKFCNQVGEGIASALLVSVSMVVLSCISAFSLFRLYGA 193
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4971_VITVI (UPF0497 membrane protein 1 OS=Vitis vinifera GN=GSVIVT00037312001 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.071e-13 Identity = 37/118 (31.36%), Postives = 60/118 (50.85%), Query Frame = -2 Query: 149 SYSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 496 SY DL AF + V AN I +GY LS I + RP M D ++ L +AA A + ++YL G+ W A+C F FC +V+ +F+A ++++ ++S++ L Sbjct: 81 SYDDLPAFSFFVIANAIASGYLFLSLPFSIVCIVRPHAMGARLLLVICDTVMVALTIAAAAAAAAIVYLAHNGNSNANWVAICQQFDDFCQSVSGAVVASFIAAVLFMLMIVLSAFSL 198
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497I_SORBI (UPF0497 membrane protein Sb08g016550 OS=Sorghum bicolor GN=Sb08g016550 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.353e-12 Identity = 50/177 (28.25%), Postives = 79/177 (44.63%), Query Frame = -2 Query: 137 EDGNAALRTAEPIARXXXXXXXXXXXXXXLKNSETSDFGSL----SYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQ------------AWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKY 619 +D ++ AE R +++T F SL SY+D+ A +LV A + AGYSLL + A MS +W F DQ L Y++LAA A + + + ++G + W +C +G FC +A A + VA V+L+ +S++ LF Y Sbjct: 11 QDAERKVKVAEVALRALLCGLGALAAALVATDTQTRTFFSLQKKASYTDMKAMVFLVDAAAVAAGYSLLQ-LAARCCGGGAMSSGRGDGGGRGRALSWCVFSCDQALAYVLLAAVAAALQASVVAKRGQPELQWMGICALYGAFCRQAGAGLATAVVAGLAAVLLAFLSAFNLFRLY 186
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497G_SORBI (UPF0497 membrane protein Sb07g000300 OS=Sorghum bicolor GN=Sb07g000300 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.766e-12 Identity = 36/116 (31.03%), Postives = 60/116 (51.72%), Query Frame = -2 Query: 158 YSDLGAFRYLVHANGICAGYSLLS----AIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISS 493 + D AF + + AN + AGY +LS ++ P +T D L+ L+ AAGA + ++Y+ G+ W +C F GFC + SV+ TF+AV ++VL L+++ Sbjct: 113 FDDFPAFTFFLVANAVAAGYLVLSLPFSVVVILRPNKATGGVRLLLLLCDVLIMALLTAAGAAAAAIVYVAHSGNRRANWVPICMQFHGFCQRTSGSVVATFLAVLVFIVLILMAA 228 The following BLAST results are available for this feature:
BLAST of DC887604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887604 ID=DC887604; Name=DC887604; organism=Citrus sinensis; type=EST; length=653bpback to top |