DC887604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4975_RICCO (UPF0497 membrane protein 5 OS=Ricinus communis GN=RCOM_1282030 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.140e-12 Identity = 35/117 (29.91%), Postives = 60/117 (51.28%), Query Frame = -2 Query: 149 YSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 493 Y+DL F + V ANGI +GY +LS I + RP + D ++ L +AA + + ++YL G+ W+A+C F FC + +V+ +F+ A L ++S++ L Sbjct: 96 YNDLPTFMFFVFANGIASGYLILSLPFSIVCIVRPLAIVPRLLLIIFDTVVMALTIAAASAAAAIVYLAHNGNSNANWNAICQQFNDFCQQTSTAVVASFITAAMLTFLIVLSAFAL 212
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497C_VITVI (UPF0497 membrane protein 12 OS=Vitis vinifera GN=GSVIVT00013502001 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.767e-12 Identity = 42/132 (31.82%), Postives = 65/132 (49.24%), Query Frame = -2 Query: 113 YSDLGAFRYLVHANGICAGYSLLSAI--IAAMPRPSTMSQ---AWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSG 493 ++D+ A +LV ANGI A YSL+ + + +M R S + AW F DQ++ YL LAA A + + G + W +C +G FC++ ++ V+LS IS++ LF Y SG Sbjct: 68 FTDMKALVFLVIANGIAAAYSLIQGLRCVVSMVRGSVLFSKPLAWAIFSGDQVIAYLTLAAVAAAAQSSVFGEFGQPELQWMKICNMYGKFCNQVGEGIVSAVGVSLSMVILSGISAFSLFRLYGGNKGTSG 199
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4978_RICCO (UPF0497 membrane protein 8 OS=Ricinus communis GN=RCOM_1259260 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.767e-12 Identity = 39/117 (33.33%), Postives = 59/117 (50.43%), Query Frame = -2 Query: 149 YSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 493 Y D F++ V A + AGY +LS I ++ RP F LD + L AAGA + +++YL G+ W A+C FG FC + SV+ +F +V +VL ++S L Sbjct: 81 YDDFPTFQFFVIAMAMVAGYLVLSLPFSIVSICRPHAAGPRILLFILDTVALTLNAAAGAAAADIVYLAHNGNQTTNWLAICLQFGDFCREVSGSVVASFASVVILMVLVVMSGLAL 197
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4979_MAIZE (UPF0497 membrane protein 9 OS=Zea mays PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 46/145 (31.72%), Postives = 71/145 (48.97%), Query Frame = -2 Query: 131 NSETSDFGSL----SYSDLGAFRYLVHANGICAGYSLLSA--------IIAAMPRP-STMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDA 526 +++T F SL +Y+D+ A LV A AGYSLL A ++ RP + + AW F DQ L Y +LAA + + + ++G + W A+C +G FC +A A V A +L+ +S++ LF Y A Sbjct: 40 DTQTRTFFSLQKKATYTDMKAMVLLVAAAAAAAGYSLLQAARCCCCVALLRTSIRPRARLLLAWCVFACDQALAYALLAAVVAALQASVVAKQGLPQLQWMAICALYGAFCRQAGAGVACAVAAAVDAALLAFLSAFNLFRLYGA 184
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4977_RICCO (UPF0497 membrane protein 7 OS=Ricinus communis GN=RCOM_1259250 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.495e-11 Identity = 38/117 (32.48%), Postives = 59/117 (50.43%), Query Frame = -2 Query: 149 YSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 493 Y D F++ V A G GY +LS + A+ RP + LD + L AA A + ++YL G+ + W AVC FG FC K V+ +FV+V +++L ++S+ L Sbjct: 81 YDDFPTFQFFVIAMGFVGGYLVLSLPFSVVAIIRPHAVGIRLLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVSGGVVASFVSVLVFLLLVVMSAVAL 197
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U497E_SORBI (UPF0497 membrane protein Sb06g018970 OS=Sorghum bicolor GN=Sb06g018970 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.551e-11 Identity = 35/121 (28.93%), Postives = 62/121 (51.24%), Query Frame = -2 Query: 137 YSDLGAFRYLVHANGICAGYSLLSAIIAAMP--RPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKY 493 YSDL +F + V AN + Y +LS ++ + RP F D ++ L+ A + + ++YL KG++ W A+C F FC + S+I +F A+ +VL +S++ L ++ Sbjct: 72 YSDLPSFTFFVAANAVVCTYLVLSIPLSIVHIIRPRARYSRLILVFFDAVMLALLTAGASAAAAIVYLAHKGNVRANWFAICQQFDSFCERISGSLIGSFAAMVLLIVLIFLSAFALARRH 192
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4975_SOYBN (UPF0497 membrane protein 5 OS=Glycine max PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.331e-11 Identity = 38/115 (33.04%), Postives = 56/115 (48.70%), Query Frame = -2 Query: 158 SYSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISS 496 SY F++ V + GY +LS I A+ RP + LD L A GA + ++YL GD W A+C FG FC + A+V+ +FVAV V+L ++S+ Sbjct: 75 SYDSFTTFQFFVITMSLVGGYLVLSLPFSIVAIVRPHAVGPRLFLIILDTAFLTLATAGGASAAAIVYLAHNGDQDTNWLAICNQFGDFCAQTSAAVVSSFVAVVVLVLLIIMSA 189
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4975_POPTR (UPF0497 membrane protein 5 OS=Populus trichocarpa GN=POPTRDRAFT_575900 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.682e-11 Identity = 37/124 (29.84%), Postives = 62/124 (50.00%), Query Frame = -2 Query: 137 YSDLGAFRYLVHANGICAGYSLLSAI--IAAMPRPSTMSQ---AWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKY 493 ++D+ A +LV ANGI A YS + + + M + S + AW F DQ++ YL ++A A + + + G + W +C +G FC++ + + VVLS IS++ LF Y Sbjct: 68 FTDMKALVFLVAANGIAAAYSFVQGVRCVVGMVKGSVLFSKPLAWVIFSGDQMMAYLTMSAVAAAAQSSVFAKLGQPDLQWMKICTMYGKFCNQVGEGIASALLVSVSMVVLSCISAFSLFRLY 191
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4974_POPTR (UPF0497 membrane protein 4 OS=Populus trichocarpa GN=POPTRDRAFT_907513 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.682e-11 Identity = 39/118 (33.05%), Postives = 59/118 (50.00%), Query Frame = -2 Query: 149 SYSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 496 SY DL F++ V A I +GY +LS I A+ RP LD + L AA A + ++ L + G+ + W +C FG FC KA +V+ +F+A + L +IS+ L Sbjct: 77 SYDDLPTFQFFVIAMAIVSGYLVLSLPFSIVAIIRPHATGPRLLLIILDTVALTLNTAAAAAAVAIVDLAQNGNSSANWLGICQQFGDFCQKASGAVVASFIAAGVLLFLIVISALAL 194
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4972_RICCO (UPF0497 membrane protein 2 OS=Ricinus communis GN=RCOM_0299440 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.682e-11 Identity = 37/117 (31.62%), Postives = 60/117 (51.28%), Query Frame = -2 Query: 149 YSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 493 Y DL F + V AN + +GY LLS I + R + ++ D + L+ A + + ++YL KG+ W A+C F FC + S+I +FV VA +++L L+S+ L Sbjct: 66 YDDLPTFTFFVVANIVVSGYLLLSLPLSIVNIVRSTAKNRRIILIIFDTAMLALLTAGASAAAAIVYLAHKGNTRANWFAICQQFNSFCERISGSLIGSFVGVAVFILLILMSASAL 182 The following BLAST results are available for this feature:
BLAST of DC887604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887604 ID=DC887604; Name=DC887604; organism=Citrus sinensis; type=EST; length=653bpback to top |