DC887604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4979_ARATH (UPF0497 membrane protein At2g36100 OS=Arabidopsis thaliana GN=At2g36100 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 36/117 (30.77%), Postives = 58/117 (49.57%), Query Frame = -2 Query: 149 YSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 493 Y DL AF+Y V A + A Y +LS I ++ RP ++ D L+ L +A A + + YL G+ + W +C FG FC +V+ +A+ ++VL +IS+ L Sbjct: 87 YDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISAIAL 203
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4972_VITVI (UPF0497 membrane protein 2 OS=Vitis vinifera GN=GSVIVT00021563001 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 36/118 (30.51%), Postives = 59/118 (50.00%), Query Frame = -2 Query: 149 SYSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 496 S+ DL AF + V A I +GY LS + ++ RP D ++ L A A +T ++YL GD + W A+C F FC +V+ +F+AV +++L ++S+ L Sbjct: 89 SFDDLPAFMFFVVATAIASGYLALSLPFSLVSIFRPHAQGIRLLLIISDTVMLALTTAGAASATAIVYLAHNGDSSANWIAICQQFTDFCQSVSGAVVASFIAVVIFMLLVMMSALAL 206
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4971_PICSI (UPF0497 membrane protein 1 OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 34/122 (27.87%), Postives = 63/122 (51.64%), Query Frame = -2 Query: 140 SLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPR-PSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSK 502 S Y AF + V AN + GY+LLS I + + ST + D ++ L+ A + + + Y+ KG+ W VCG + FCH +++ +FV++ ++VL+++S+Y + + Sbjct: 75 SAKYQYSPAFVFFVIANAVACGYTLLSLIFSITGKFTSTPLSVFLLSVTDLVMVALVSAGVSAAAAIAYVGYKGNSHTQWGKVCGIYDRFCHHGAGAIVASFVSLIIFMVLTVMSTYSFYRR 196
BLAST of DC887604 vs. ExPASy Swiss-Prot
Match: U4973_VITVI (UPF0497 membrane protein 3 OS=Vitis vinifera GN=GSVIVT00020996001 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11 Identity = 35/117 (29.91%), Postives = 60/117 (51.28%), Query Frame = -2 Query: 149 YSDLGAFRYLVHANGICAGYSLLSAIIAAMP--RPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 493 Y DL F + V AN I +GY +LS ++ + R + F D + L+ AA + ++ ++YL KG+ W A+C F FC + S+I +F + +++L L+S+ L Sbjct: 67 YDDLPTFTFFVIANSIVSGYLVLSLPMSILHIVRSGARASRIVLIFFDTAMLALLTAAASAASAIVYLAHKGNAQANWFAICQQFKSFCERISGSLIGSFGGIILFILLVLLSAVAL 183 The following BLAST results are available for this feature:
BLAST of DC887604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887604 ID=DC887604; Name=DC887604; organism=Citrus sinensis; type=EST; length=653bpback to top |