DC887601

Overview
NameDC887601
Unique NameDC887601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length341
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.210e-14
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = -3
Query:  175 AARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 339
            AARTT DR+AACNCLK + G+I G+KP   A LP +CGVR+PY IS ST+C+ +R
Sbjct:   63 AARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117          
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.181e-14
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = -3
Query:  178 AARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 339
            AA TT DRQ  C CLK+    + G++P++ AG+PS+CGV IPY ISPSTDCSRV
Sbjct:   65 AAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118          
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.600e-13
Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = -3
Query:  178 AARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 339
            AARTT DR+AACNCLK A   + G+    AA +PS+CGV IPY IS STDCSRV
Sbjct:   66 AARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119          
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.600e-13
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = -3
Query:  175 AARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 339
            AA+T  DR+ AC CLK A  +I+GI    AAGLP  CGV IPYKISPSTDCS V+
Sbjct:   60 AAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114          
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.600e-13
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = -3
Query:  175 AARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 339
            +A+TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPSTDCS V+
Sbjct:   60 SAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.600e-13
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = -3
Query:  175 AARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 339
            +A+TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPSTDCS V+
Sbjct:   60 SAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.089e-13
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = -3
Query:  175 AARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 339
            AA TT DRQAACNCLK A G+I  +  N AA LP +CGV IPYKIS ST+C+ V+
Sbjct:   55 AANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109          
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.089e-13
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = -3
Query:  178 AARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 339
            ++RTT DR+A C+CLK A G +RGI PN A  LP +CGV IPYKIS ST+C+ +
Sbjct:   37 SSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90          
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.729e-13
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = -3
Query:  175 ARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 336
            A+TT DRQ ACNCLK+   ++ G+  N AA LP +CGV +PYKISPST+C+ V+
Sbjct:   64 AKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117          
BLAST of DC887601 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.729e-13
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = -3
Query:  175 AARTTXDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 339
            AA++  DR+ AC CLK A   I+GI    AAGLP  CGV IPYKISPSTDCS+V+
Sbjct:   60 AAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114          
The following BLAST results are available for this feature:
BLAST of DC887601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
NLTP1_LENCU4.210e-1461.82Non-specific lipid-transfer protein 1 OS=Lens culi... [more]
NLTP4_ORYSJ7.181e-1461.11Non-specific lipid-transfer protein 4 OS=Oryza sat... [more]
NLTP_MAIZE1.600e-1364.81Non-specific lipid-transfer protein OS=Zea mays PE... [more]
NLTP2_SOLLC1.600e-1363.64Non-specific lipid-transfer protein 2 OS=Solanum l... [more]
NLTP1_SOLPN1.600e-1363.64Non-specific lipid-transfer protein 1 OS=Solanum p... [more]
NLTP1_SOLLC1.600e-1363.64Non-specific lipid-transfer protein 1 OS=Solanum l... [more]
NLTP4_LENCU2.089e-1363.64Non-specific lipid-transfer protein 4 (Fragment) O... [more]
NLTP1_PHAAU2.089e-1359.26Non-specific lipid-transfer protein 1 OS=Phaseolus... [more]
NLTP_PRUAV2.729e-1357.41Non-specific lipid-transfer protein OS=Prunus aviu... [more]
NLTP2_TOBAC2.729e-1361.82Non-specific lipid-transfer protein 2 OS=Nicotiana... [more]

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Properties
Property NameValue
Genbank descriptionDC887601 EIC Citrus sinensis cDNA clone EIC0615 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887601 ID=DC887601; Name=DC887601; organism=Citrus sinensis; type=EST; length=341bp
CGCGTTTACATATTTAATATGACATAAAAAGCAAATATACAAACATGACA
TGAGAGTGAAACTCATACAAGTGGAGACTCGTTCGGACAAAGAAATTAAC
ATAGATATTCTTTATTTATTTATTCTTCTCAGTCAATCATACTTGGAAAG
TCACAGAGCTCAAACTCAACTTCACCTGACCCTAGAGCAGTCGGTGCTGG
GGCTGATCTTGTAAGGAATTCTGACTCCACATTGACTAGGAAGGCCAGCG
GCAACATTAGGTTTGATGCCGCGGATTGTTCCGTAAGCTCGTTTCAAGCA
GTTGCATGCAGCTTGGCGGTCANGGGTGGTTCTGGCGGCGC
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