DC887599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.370e-30 Identity = 52/106 (49.06%), Postives = 82/106 (77.36%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 +E L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+ Y YV++E+LKELL+KA +GE +K++PWF+++ + FLFKWWD+L LN+ +D + I+++ Sbjct: 126 EEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSKEELKELLKKAASGE--IKITPWFKIIAETFLFKWWDNLNH--LNQFVDHEKIYRI 227 HSP 2 Score: 32.3426 bits (72), Expect = 1.370e-30 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 L E +ALGVR AAQR+L ELGI E+ Sbjct: 96 LEENDALGVRRAAQRRLKAELGIPLEE 122
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 3.939e-30 Identity = 54/112 (48.21%), Postives = 82/112 (73.21%), Query Frame = -3 Query: 271 LKMCQFDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 606 L+ +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+LKE+L+K GE +KL+PWF+++ D FLFKWWD+L L+ +D + IH++ Sbjct: 120 LEEVDLNEMNYLTRIYYKAQSDGIWGEHEIDYILFLRKNVTLNPDPNEIKSYCYVSKEELKEILKKEARGE--IKLTPWFKIIADAFLFKWWDNLNH--LSPFVDHEKIHRM 227 HSP 2 Score: 30.4166 bits (67), Expect = 3.939e-30 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 L E +A+GV+ AAQR+L ELGI E+ Sbjct: 96 LEENDAMGVKRAAQRRLKAELGIPLEE 122
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_HUMAN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo sapiens GN=IDI1 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.939e-30 Identity = 52/106 (49.06%), Postives = 81/106 (76.42%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 +E L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+ Y YV++E+LKELL+KA +GE +K++PWF+++ FLFKWWD+L LN+ +D + I+++ Sbjct: 126 EEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSKEELKELLKKAASGE--IKITPWFKIIAATFLFKWWDNLNH--LNQFVDHEKIYRM 227 HSP 2 Score: 32.3426 bits (72), Expect = 3.939e-30 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 L E +ALGVR AAQR+L ELGI E+ Sbjct: 96 LEESDALGVRRAAQRRLKAELGIPLEE 122
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_BOVIN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos taurus GN=IDI1 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 5.516e-29 Identity = 51/106 (48.11%), Postives = 78/106 (73.58%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 +E L RI YKA SD WGEHE+DY+L + ++V++NP+P+E+ Y YV +E+L+EL+ KA GE +K++PWF+++ D FLFKWWD+L + LN +D + IH++ Sbjct: 126 EEINYLTRIHYKAQSDSIWGEHEIDYILLVKKNVTLNPDPNEIKSYCYVTKEELEELIGKAAHGE--IKITPWFQIIADTFLFKWWDNLNR--LNLFVDHEKIHRM 227 HSP 2 Score: 31.5722 bits (70), Expect = 5.516e-29 Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 L E +A+GVR AAQR+L ELGI E+ Sbjct: 96 LEENDAIGVRRAAQRRLKAELGIPMEE 122
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.071e-22 Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = -3 Query: 316 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWW---DHLEK 588 D+F L RI Y APS G WGEHE+DY+LF V ++ NP+EV YKYV E+LKE+ G +PWF+L+ ++F+FKWW DH K Sbjct: 130 DKFQFLTRIHYLAPSTGAWGEHEIDYILFFKGKVELDINPNEVQAYKYVTMEELKEMFSDPQYG-----FTPWFKLICEHFMFKWWQDVDHASK 218 HSP 2 Score: 30.0314 bits (66), Expect = 4.071e-22 Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = -2 Query: 602 IEENALGVRNAAQRKLLDELGICAE 676 + E GV+NAAQRKL ELGI A+ Sbjct: 101 LPEAVEGVKNAAQRKLFHELGIQAK 125
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.333e-21 Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = -3 Query: 268 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHL-----EKGTLNEVIDMKTIHKLT 588 D FT L RI Y APSDG WGEHE+DY+LF NP+EV++ +YV + +L+ + +E +PWF+L+ +FLF WWD L EKG +D K++ L+ Sbjct: 142 DSFTYLTRIHYLAPSDGLWGEHEIDYILFSTTPTEHTGNPNEVSDTRYVTKPELQAMFE-----DESNSFTPWFKLIARDFLFGWWDQLLARRNEKGE----VDAKSLEDLS 244 HSP 2 Score: 30.8018 bits (68), Expect = 3.333e-21 Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = -2 Query: 611 EENALGVRNAAQRKLLDELGI 673 EEN +GVR AA RKL ELG+ Sbjct: 114 EENQIGVRRAASRKLEHELGV 134
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.337e-21 Identity = 45/115 (39.13%), Postives = 76/115 (66.09%), Query Frame = -3 Query: 274 LKMCQFDEFTPLGRILYKAPS--DGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVID-MKTIHK 606 L D+FT + +I YK+ S D +WGEHE+D++L + +D +++N P+EV +YKYV++E+L +L + D G+ +K++PWFRL+ N L WW++L L +++ TIH+ Sbjct: 128 LDQVNIDDFTFMTKIHYKSESKEDPQWGEHEIDHILIMQKDGITINAEPNEVMDYKYVSQEELDQLFKDEDEGK--VKVTPWFRLIALNHLKPWWNNL--NNLKPLVEPTNTIHR 238 HSP 2 Score: 31.9574 bits (71), Expect = 3.337e-21 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = -2 Query: 611 LIEENALGVRNAAQRKLLDELGI 679 L+EENA GV+ AA+RKL ELG+ Sbjct: 104 LVEENAQGVKIAAKRKLNHELGV 126
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.106e-20 Identity = 38/96 (39.58%), Postives = 64/96 (66.67%), Query Frame = -3 Query: 271 YKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 558 +KA SD WGEHE+ YLL + ++V++NP+P E Y+++E+L ELL + GE +K++PW R + + FL++WW HL+ T +++ IH++ Sbjct: 136 HKAKSDRIWGEHEICYLLLVRKNVTLNPDPSETKSILYLSQEELWELLEREARGE--VKVTPWLRTIAERFLYRWWPHLDDVT--PFVELHKIHRV 227 HSP 2 Score: 31.5722 bits (70), Expect = 2.106e-20 Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = -2 Query: 602 LIEENALGVRNAAQRKLLDELGICAE 679 L E++A+GVR AAQR+L ELGI E Sbjct: 96 LEEKDAIGVRRAAQRRLQAELGIPGE 121
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 42/109 (38.53%), Postives = 69/109 (63.30%), Query Frame = -3 Query: 271 EFTPLGRILYKAPSDGKWGEHELDYLLF----IVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 585 +F L RI Y APS+ WGEHE+DY+LF +++VNPN +EV ++K+V+ LK + + K +PWF+++ +N+LF WW+ L+ L+EV + + IH++ Sbjct: 186 KFHFLNRIHYMAPSNEPWGEHEIDYILFYKINAKENLTVNPNVNEVRDFKWVSPNDLKTMF-----ADPSYKFTPWFKIICENYLFNWWEQLD--DLSEVENDRQIHRM 287 The following BLAST results are available for this feature:
BLAST of DC887599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887599 ID=DC887599; Name=DC887599; organism=Citrus sinensis; type=EST; length=680bpback to top |