DC887597

Overview
NameDC887597
Unique NameDC887597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length376
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.124e-13
Identity = 26/46 (56.52%), Postives = 37/46 (80.43%), Query Frame = -1
Query:  239 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKL 376
            GF+CRCG +FCG HRY ++HGCS+D+K   R+ IAR NP+++A K+
Sbjct:  116 GFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161          
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.124e-13
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = -1
Query:  233 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEK 376
            GF+CRCG  FC THR+ +KH C+FDFKK  RE+IA+ NPLI A K+ K
Sbjct:  176 GFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKITK 223          
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.061e-12
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = -1
Query:  239 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKL 376
            GFKCRCG  FCG HR+ + HGC FD+K  G+E+IA+ NPL+ A+KL
Sbjct:  120 GFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKL 165          
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.364e-12
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = -1
Query:  239 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKL 376
            GF+CRCG ++CG HRY ++H CSFD+K   R+ IAR NP+++A K+
Sbjct:  122 GFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKI 167          
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.822e-11
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = -1
Query:  230 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 376
            GF CRCG +FCG HRY +KH C +D+K     +I + NP++ AEK+++I
Sbjct:  165 GFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.822e-11
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = -1
Query:  230 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 376
            GF CRCG +FCG HRY +KH C +D+K     +I + NP++ AEK+++I
Sbjct:  165 GFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.822e-11
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -1
Query:  230 FKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 373
            ++CRCG  FC +HRY E HGC++D+K  GR  +  ANP++ A KL KI
Sbjct:  680 YECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNAPKLPKI 727          
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = -1
Query:  230 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 376
            GF+CRCG ++CG HRY + H CS+++K    E+I + NP++  EK++KI
Sbjct:  175 GFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = -1
Query:  230 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 376
            GF+CRCG ++CG HRY + H CS+++K    E+I + NP++  EK++KI
Sbjct:  160 GFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = -1
Query:  230 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 376
            GF+CRCG ++CG HRY + H CS+++K    E+I + NP++  EK++KI
Sbjct:  175 GFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
The following BLAST results are available for this feature:
BLAST of DC887597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
SAP1_ORYSI8.124e-1356.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP12_ORYSJ8.124e-1362.50Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ORYSJ1.061e-1260.87Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ2.364e-1254.35Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_MOUSE5.822e-1148.98AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN5_HUMAN5.822e-1148.98AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
ANUB1_HUMAN5.822e-1152.08AN1-type zinc finger and ubiquitin domain-containi... [more]
ZFAN6_RAT9.931e-1146.94AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_PONAB9.931e-1146.94AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_MOUSE9.931e-1146.94AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionDC887597 EIC Citrus sinensis cDNA clone EIC0609 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887597 ID=DC887597; Name=DC887597; organism=Citrus sinensis; type=EST; length=376bp
CATTTCTTTTTTAACCCAAACTTTTTACATGCATTTAAAAAAAGAAAAAG
AAAAAAAGAAGAAGCCAAAATTAACCTTATTAAAAATTAAAATTAAGAAA
AAAAGAAAAAAGAGAGAATATTTATCAACCATCAAGCCTCAGGCATGACC
GGATGTACGGTCCTGACGACGTTGATTACACGACGTCTTCATTTCCTAAA
AAGTAATGAGATCCGGACGGTGGGAATCAAATCTTCTCGAGCTTCTCGGC
TTTGATCAAAGGATTAGCTCGAGCAATCTCCTCTCGGCCAACCTTCTTGA
AATCAAACGAGCATCCGTGCTTCTCCGGGTACCGGTGGGTCCCACAGAAG
ATGGTCCCGCACCTGCACTTGAAACC
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