DC887597

Overview
NameDC887597
Unique NameDC887597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length376
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = -1 
Query:  230 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 376
            GF+CRCG ++CG HRY + H CS+++K    E+I + NP++  EK++KI
Sbjct:  160 GFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208
[Close]
BLAST of DC887597 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = -1 
Query:  230 GFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 376
            GF+CRCG ++CG HRY + H CS+++K    E+I + NP++  EK++KI
Sbjct:  160 GFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208
The following BLAST results are available for this feature:
BLAST of DC887597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ZFAN6_HUMAN9.931e-1146.94AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN6_BOVIN9.931e-1146.94AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]

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Properties
Property NameValue
Genbank descriptionDC887597 EIC Citrus sinensis cDNA clone EIC0609 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887597 ID=DC887597; Name=DC887597; organism=Citrus sinensis; type=EST; length=376bp
CATTTCTTTTTTAACCCAAACTTTTTACATGCATTTAAAAAAAGAAAAAG
AAAAAAAGAAGAAGCCAAAATTAACCTTATTAAAAATTAAAATTAAGAAA
AAAAGAAAAAAGAGAGAATATTTATCAACCATCAAGCCTCAGGCATGACC
GGATGTACGGTCCTGACGACGTTGATTACACGACGTCTTCATTTCCTAAA
AAGTAATGAGATCCGGACGGTGGGAATCAAATCTTCTCGAGCTTCTCGGC
TTTGATCAAAGGATTAGCTCGAGCAATCTCCTCTCGGCCAACCTTCTTGA
AATCAAACGAGCATCCGTGCTTCTCCGGGTACCGGTGGGTCCCACAGAAG
ATGGTCCCGCACCTGCACTTGAAACC
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