DC887596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5B_XENLA (60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-B PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.269e-28 Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = -1 Query: 200 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVER 628 F C TTTGN+VF IPHS KRF G+ +SK+ + EVHRK+I+ ++A YMR LME++ + Y+ F +YIK G+ AD LE++YKK HA IR +P +K KK + KR+N KL+ E++K R+ ++ Sbjct: 142 FTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEEDEDAYKKQFSQYIKNGVAADQLEDIYKKAHAGIRENPVHEKKPKK-EVKKKRWNRAKLSLEQKKDRVAQK 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5A_XENLA (60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-A PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.269e-28 Identity = 62/143 (43.36%), Postives = 88/143 (61.54%), Query Frame = -1 Query: 200 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVER 628 F C TTTGN+VF IPHS KRF G+ +SK+ + EVHRK+I+ +VA YMR LME++ + Y+ F +YIK G+ AD +E+LYKK HA IR +P +K KK + KR+N KL+ E++K R+ ++ Sbjct: 142 FTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEEDEDAYKKQFSQYIKNGVTADQVEDLYKKAHAGIRENPVHEKKPKK-EVKKKRWNRAKLSLEQKKDRVAQK 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.165e-28 Identity = 66/141 (46.81%), Postives = 87/141 (61.70%), Query Frame = -1 Query: 209 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPA-EHKRYNLKKLTYEERKARL 628 F C TTTG RVF +IPHS KRF G+S ++K +A+VHR +I+ HVA YMR+L E++ E ++ F YIK GI AD+LE++YKK H AIR DP K + KK A KR+N KKLT E+RK ++ Sbjct: 142 FRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKI 282
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_AEDAE (60S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.394e-27 Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = -1 Query: 203 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPN-QKKSEKKPPAEHKRYNLKKLTYEERKARLVE 628 F C TTTG R+F +IPHS KRF G+S ++K +AEVHR +I+ HVA YMRTL E++ + Y+ F +YI GI+AD++E +YK HA IR DP KK EKK KR+NL KLT E RKA++ + Sbjct: 142 FRCYLDVGLARTTTGARIFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEVHRAHIFGQHVADYMRTLEEEDEDAYKRQFSKYIALGIKADDIETIYKNAHAGIRKDPAFHKKPEKK--VTKKRFNLAKLTLEARKAKIAK 282
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.126e-27 Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = -1 Query: 191 RPFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKA 634 RPF TTTGNRVF DIPHS RF G+ ++S QL+A+ R+YI+ GHV+ YM+ L E++ EKY++HF +IK GI AD++E++Y+ HA IRA+P +K + + KR+N K++ ++++ R+ ++ A Sbjct: 140 RPFRAFLDVGLTRTTTGNRVFAAMKGAVDGGIDIPHSPSRFVGYDEESSQLEADKLRQYIFGGHVSDYMKYLQEEDEEKYKAHFSRFIKEGITADSMEQMYRDAHAKIRANPAHEKKQPRDGLVKKRWNRAKMSLKQKRDRVKQKKAA 287
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_DUNSA (60S ribosomal protein L5 OS=Dunaliella salina GN=RPL5 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.083e-27 Identity = 60/129 (46.51%), Postives = 83/129 (64.34%), Query Frame = -1 Query: 248 RPFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYN 634 +PF C T+TG++VF DIPH+EKRF G++ K+LD EV +KYIY GHVA Y T+ E+EPEKYQ+HF Y++ IE D +E++YK+VHA IR +P K E+ PA+ KR++ Sbjct: 140 KPFYCLLDTGLKRTSTGSKVFAAMKGALDGGLDIPHNEKRFVGYA--DKKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYVENEIEPDGIEDMYKEVHAKIRENPCPPKKERTKPADAKRWS 266
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_TOXCI (60S ribosomal protein L5 OS=Toxoptera citricida GN=RpL5 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.097e-27 Identity = 65/143 (45.45%), Postives = 86/143 (60.14%), Query Frame = -1 Query: 203 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPA-EHKRYNLKKLTYEERKARLVE 628 F C +T+TG RVF +IPHS KRF G+ ++K+ AE HRK+I HVA YMR L E++ + + F +YIK GI AD+LE +YKK H IR+DP + + KK + E KR+N KKLT ERK R+VE Sbjct: 142 FRCNLDVGLMKTSTGARVFGAMKGAVDGGFNIPHSVKRFPGYDAEAKEYSAETHRKHILGLHVAEYMRKLEEEDEDAFNRQFSQYIKLGIVADDLENMYKKAHENIRSDPKRDRKPKKDVSKEPKRWNAKKLTNAERKQRVVE 284
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_MACFA (60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 2.027e-26 Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = -1 Query: 200 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVER 628 F C TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK + D +EE+YKK HAAIR +P +K KK + KR+N K++ ++K R+ ++ Sbjct: 142 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKK-EVKKKRWNRPKMSLAQKKDRVAQK 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 2.027e-26 Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = -1 Query: 200 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVER 628 F C TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK + D +EE+YKK HAAIR +P +K KK + KR+N K++ ++K R+ ++ Sbjct: 142 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKK-EVKKKRWNRPKMSLAQKKDRVAQK 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_RAT (60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 4.515e-26 Identity = 59/143 (41.26%), Postives = 86/143 (60.14%), Query Frame = -1 Query: 200 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVER 628 F C TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK + D +EE+YKK HAAIR +P +K K+ + KR+N K++ ++K R+ ++ Sbjct: 142 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKR-EVKKKRWNRPKMSLAQKKDRVAQK 283 The following BLAST results are available for this feature:
BLAST of DC887596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887596 ID=DC887596; Name=DC887596; organism=Citrus sinensis; type=EST; length=634bpback to top |