DC887596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_MOUSE (60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 4.515e-26 Identity = 59/143 (41.26%), Postives = 86/143 (60.14%), Query Frame = -1 Query: 200 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVER 628 F C TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK + D +EE+YKK HAAIR +P +K K+ + KR+N K++ ++K R+ ++ Sbjct: 142 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKR-EVKKKRWNRPKMSLAQKKDRVAQK 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 4.515e-26 Identity = 60/143 (41.96%), Postives = 85/143 (59.44%), Query Frame = -1 Query: 200 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVER 628 F C TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I +VA YMR LME++ + Y+ F +YIK I D +EE+YKK HAAIR +P +K K+ + KR N K++ ++K R+ ++ Sbjct: 142 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNPVHEKKPKR-EVKKKRVNSTKMSLAQKKDRVAQK 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 7.701e-26 Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = -1 Query: 200 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVER 628 F C TTTGN+VF IPHS KRF G+ +SK+ AEVHRK+I +VA YMR L+E++ + Y+ F +YIK + D +EE+YKK HAAIR +P +K KK + KR+N K++ ++K R+ ++ Sbjct: 142 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLIEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKK-EVKKKRWNRPKMSLAQKKDRVAQK 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 58/132 (43.94%), Postives = 83/132 (62.88%), Query Frame = -1 Query: 200 TTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVER 595 TTTG +VF DIPHS KRF G+ +S AEVHR +I+ GHV+ YM+ L E++ E ++ F +YIK G+ AD +EE+Y K HAAIR DP KK + + KR+N KK+T+ +R+ R+ ++ Sbjct: 153 TTTGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGVTADTVEEMYTKAHAAIREDPTPKK-KTDFAGKTKRWNRKKMTFSQRRDRVKQK 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_HELAN (60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = -1 Query: 209 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARL 628 F C TTTG RVF +I HS KRF GF +SK+ +A+VHR++I+ HVA YMR L E++ E Y+ F +YIK G+ AD +E LYKK H AIRA+P +K KK + KR+ KKLT E+R+ ++ Sbjct: 142 FRCYLDVGLMRTTTGARVFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEAYKRQFSQYIKLGLNADAIEGLYKKAHEAIRANPARKTVAKKAHPK-KRWTEKKLTREQRQGKV 280
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_OIKDI (60S ribosomal protein L5 OS=Oikopleura dioica GN=RPL5 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 62/142 (43.66%), Postives = 86/142 (60.56%), Query Frame = -1 Query: 203 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVE 628 F C T+TG R+F DIPHS KRF GF+ D K L+AE H+ +I+ GHV YM L E+ E Y+ F +IK GI ++N+EE+YKK HAAIRADP+ K +K + KR+N K++Y +R+AR+ + Sbjct: 152 FRCYLDTGLARTSTGARIFGVLKGCADAGIDIPHSPKRFPGFA-DGK-LNAEAHKDHIFGGHVGDYMEKLEEENEEAYKRQFSRFIKNGINSENIEEMYKKAHAAIRADPSPKAKVEK-TVDKKRWNRAKISYAQRRARVAQ 290
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5B_SCHPO (60S ribosomal protein L5-B OS=Schizosaccharomyces pombe GN=rpl5b PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = -1 Query: 212 RPFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKP---PAEHKRYNLKKLTYEERKAR 634 RPF T+TG+RVF IPHS RF GF ++++LD E RKYIY GHVA YM L++D+ E+YQ F I GIE+D LE++Y + +A IR DP+ +KS K AE +Y +KLT EERK R Sbjct: 140 RPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERKER 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_CAEBR (60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 6.519e-25 Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = -1 Query: 188 PFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKAL 631 PF TTTG+++F ++PHSE RF GF ++SK +AE HR I HVA YM L E++ ++Y+ F +++ G+ ADNL Y+K HA IRADP+ S KK KR+ K+LTY+ERK R+ ++ KAL Sbjct: 140 PFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKDYNAEAHRDRILGKHVADYMSLLKEEDEDRYKRQFSKFLSNGMNADNLVATYQKAHANIRADPS--PSAKKAAKPSKRHTAKRLTYDERKQRVADK-KAL 284
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5A_SCHPO (60S ribosomal protein L5-A OS=Schizosaccharomyces pombe GN=rpl5a PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.452e-24 Identity = 63/144 (43.75%), Postives = 83/144 (57.64%), Query Frame = -1 Query: 212 RPFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKP---PAEHKRYNLKKLTYEERKAR 634 RPF T+TG+RVF IPHS RF GF ++++LD E RKYIY GHVA YM L++D+ E+YQ F I GIE+D LE++Y + +A IR DP+ +KS K AE ++ +KLT EERK R Sbjct: 140 RPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRKLTAEERKER 283
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_YEAST (60S ribosomal protein L5 OS=Saccharomyces cerevisiae GN=RPL5 PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 1.897e-24 Identity = 62/154 (40.26%), Postives = 87/154 (56.49%), Query Frame = -1 Query: 188 RPFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKK-----PPAEHKRYNLKKLTYEERKARLVERLKAL 634 RPF TTTG RVF +PHSE RF G+ +++++D E+ R YI+ GHV+ YM L +D+ E++ F Y+ I+AD+LE++Y H AIRADP K +EKK AE K+Y KL+ EER AR+ ++ AL Sbjct: 140 RPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAKIAAL 293 The following BLAST results are available for this feature:
BLAST of DC887596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887596 ID=DC887596; Name=DC887596; organism=Citrus sinensis; type=EST; length=634bpback to top |