DC887596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_CAEEL (60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.897e-24 Identity = 60/148 (40.54%), Postives = 88/148 (59.46%), Query Frame = -1 Query: 188 PFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKAL 631 PF TTTG+++F ++PHSE RF GF ++SK+ +AE HR I HVA YM L E++ ++Y+ F +++ G+ ADNL Y+KVH+AIRAD + + KK KR+ K+LTY+ERK R+ ++ KAL Sbjct: 140 PFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADAS--PAAKKAAKPSKRHTAKRLTYDERKQRVADK-KAL 284
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_ANOGA (60S ribosomal protein L5 OS=Anopheles gambiae GN=RpL5 PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 5.165e-22 Identity = 53/139 (38.13%), Postives = 80/139 (57.55%), Query Frame = -1 Query: 212 FPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKAR 628 F C TTTG RVF +IPHS KRF G+S ++K +AE+HR +I+ HVA YMRTL E++ E ++ F +YI GI+AD++E +YK HA+IR P+++ ++ P R+ + R++R Sbjct: 142 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSR 280
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.151e-21 Identity = 61/162 (37.65%), Postives = 85/162 (52.47%), Query Frame = -1 Query: 194 RPFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLD----AEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKK-----------PPAEHKRYNLKKLTYEERKARLVERLK 634 RPF C TT GNRVF IPHS KRF GF+K D EVHR IY HVA YMRTL E++PE+YQ+ F YI+ I+ D++E++Y++ IRA+P+ K E + A+ + KL E RK R++++++ Sbjct: 140 RPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIYGLHVAEYMRTLKEEDPERYQAQFSAYIRNKIDPDSIEKMYEEAFQKIRANPDPVKKEAREVKRVRQGAMIKTAKSQYVRNVKLDKETRKERVLKKIQ 301
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_DICDI (60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21 Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = -1 Query: 209 RPFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARL 634 RPF T+TG +VF +PH E RFAG++ +SK+L+AE R YI+ HVA+YM L ++ + Y+ F +YIK G+ ++E +Y H AIRA+P K + K NL K T +++KAR+ Sbjct: 140 RPFKANLDVGLARTSTGAKVFAVLKGAVDGGIYVPHGETRFAGYNAESKKLNAETLRGYIFGKHVASYMTLLQTEDEDAYKKIFSQYIKNGVAPKDIETIYANAHKAIRANPAPAAKSTKSYKDIKSKNLSKRTLKQKKARV 281
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_THEPA (60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.835e-20 Identity = 58/151 (38.41%), Postives = 80/151 (52.98%), Query Frame = -1 Query: 191 RPFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQ---LDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKA 634 RPF TTGNRVF +PHSEKRF G+S D + DA+ HR I+ HVA YM L E++PEKY+ F Y+K G+++++LE++Y K H IR +P ++ K +H R K LT + R V+ KA Sbjct: 140 RPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGSYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKRQFSAYLKLGLDSESLEDMYAKAHENIRKNP-VLPTKPKRKLKHVREGSKVLTSKGSYVRNVKISKA 289
BLAST of DC887596 vs. ExPASy Swiss-Prot
Match: RL5_THEAN (60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.077e-19 Identity = 57/151 (37.75%), Postives = 79/151 (52.32%), Query Frame = -1 Query: 191 RPFPCXA*CWSCETTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQ---LDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKA 634 RPF TTGNRVF +PHSEKRF G+S D + DA+ HR I+ HVA YM L E++PEKY+ F Y+K G+++++LE++Y H IR +P ++ K +H R K LT + R V+ KA Sbjct: 140 RPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGTYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKKQFSAYLKLGLDSESLEDMYASAHENIRKNP-VLPTKPKRKLKHVREGSKVLTSKGSYVRNVKITKA 289 The following BLAST results are available for this feature:
BLAST of DC887596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887596 ID=DC887596; Name=DC887596; organism=Citrus sinensis; type=EST; length=634bpback to top |