DC887594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_KLUMA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces marxianus GN=CSE4 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.955e-11 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = -2 Query: 173 LLIRKLPFQRLVREIAQDFKTD---LRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 394 LLI ++PF RLV+E+ F +D LR+ VGL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 114 LLISRMPFARLVKEVTDQFASDEEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 190
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_KLULA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces lactis GN=CSE4 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.955e-11 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = -2 Query: 173 LLIRKLPFQRLVREIAQDFKTD---LRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 394 LLI ++PF RLV+E+ F T+ LR+ VGL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 106 LLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 182
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_ASHGO (Histone H3-like centromeric protein CSE4 OS=Ashbya gossypii GN=CSE4 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.688e-11 Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = -2 Query: 173 LLIRKLPFQRLVREIAQDFKT---DLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 394 LLI ++PF RLV+E+ F T +R+ VGL E TNL A+HAKRVT+M KD+QLARRIRG+ Sbjct: 126 LLISRMPFARLVKEVTDQFTTVDQQMRWQSMAILALQEASEAYIVGLLEHTNLLALHAKRVTVMRKDMQLARRIRGQ 202
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_LEIIN (Histone H3 OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.429e-11 Identity = 40/75 (53.33%), Postives = 44/75 (58.67%), Query Frame = -2 Query: 170 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 394 LLI+ PFQRLVR + + K LRF V L DTNL IHAKRVTI PKDIQLA R+RGER Sbjct: 55 LLIQCAPFQRLVRGVERQ-KEGLRFQSSAIMALQEATEAYIVSLMADTNLACIHAKRVTIQPKDIQLALRLRGER 128
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H31_ENCCU (Histone H3.1 OS=Encephalitozoon cuniculi GN=HHT1 PE=3 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.429e-11 Identity = 36/82 (43.90%), Postives = 45/82 (54.88%), Query Frame = -2 Query: 152 LIRKLPFQRLVREIAQDFK--TDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*ELSD 391 LIR+LPFQR R + ++ TD+RF VGLFED LCA HAKRVT+ PKDI L ++R +SD Sbjct: 63 LIRRLPFQRACRSVVKECSNATDIRFQGPALASIQEALEVYLVGLFEDAMLCAYHAKRVTVFPKDISLVLKLRSRHVKSISD 144 The following BLAST results are available for this feature:
BLAST of DC887594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887594 ID=DC887594; Name=DC887594; organism=Citrus sinensis; type=EST; length=395bpback to top |