DC887593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BACWK (Ribose-5-phosphate isomerase A OS=Bacillus weihenstephanensis (strain KBAB4) GN=rpiA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.651e-35 Identity = 78/199 (39.20%), Postives = 120/199 (60.30%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + ++G +++G +I +PTSK+T A L IPL L+ ++DL IDGADE++ + L+KG GG+LLREK+V + K+ ++I DESKLV HLG +P+E++ + WK T KR+Q L GC LR +PF+TDNGN +ID I + + + GVVE G+F++M + I+ ++ G+ Sbjct: 28 STVYWTIQKLGHRVQEG--LSIQAVPTSKETEVLAKQLSIPLISLNEIDILDLTIDGADEINNDLQLIKGGGGALLREKIVATSSKELIIIADESKLVSHLG--TFPLPIEIISFSWKQTEKRIQSL----GCETHLRMKDSRPFITDNGNLIIDCIFPNKILNPNDTHTELKMITGVVETGLFINMKSKAIIGTKNGI 218
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BACC1 (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 10987) GN=rpiA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.651e-35 Identity = 77/199 (38.69%), Postives = 123/199 (61.81%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST ++++GE +++G + +PTSK+T A L IPL L+ +DL IDGADE+D ++L+KG GG+LLREK+V + K+ ++I DESKLV HLG +PVE++P+ WK T ++Q L GC LR ++ F+TDN N +ID +I + +++ + GVVE G+F++M + I+ ++ G+ Sbjct: 27 STVYWTIEKLGERVKEG--LSFQAVPTSKETEVLAQQLNIPLISLNDIQSLDLTIDGADEIDSNLHLIKGGGGALLREKIVASSSKELLIIADESKLVTHLG--TFPLPVEIIPFSWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIIDCVFPHNITNPANLHNHLKMITGVVETGLFVNMTSKAIIGTKNGI 217
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_SYNJA (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpiA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.816e-35 Identity = 87/201 (43.28%), Postives = 127/201 (63.18%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVD-PFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGD-QPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA AV + + +++ L +G+PTS++T EQA SLGIPL+ L+ P +DLAIDGADE++ +NL+KG GG+LLREK+V + + ++I D SK V HL G+ +PVEVV + WK T R++ L GC A LR T + P++TD +Y++D K+A + + GVVEHG+F+ MAT I+A G+ Sbjct: 31 STAAFAVGALAQRMQKEGL-QFIGVPTSERTAEQARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIADASKKVAHL-GTRFPVPVEVVRFGWKTTLARVEAL----GCQAVLRRTAEGDPYLTDEQHYILDCQFGPIANPAKLA-EQLKGTVGVVEHGLFIGMATEAIIAGPEGI 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHOPT (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain TIE-1) GN=rpiA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.816e-35 Identity = 89/202 (44.06%), Postives = 125/202 (61.88%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGC--VAKLRTTGD-QPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STAKH V+ +GE +R G I+G+PTS+ T A GI L+ LD +D+ IDGADEVD ++L+KG GG+LLREK+V A + +VI DESKLV LG +P+EV+P+ T + LQ+ F GC KLR D FVTD G++++D L + I D + + + GVVEHG+F+ MA+TV++A G+ Sbjct: 30 STAKHFVELLGERVRLG--LEIIGVPTSEVTRADAERCGIRLTSLDEIDRLDITIDGADEVDHHLDLIKGGGGALLREKIVAAASDRMIVIADESKLVDTLG--RFPLPIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGGHWILDAQLGR-IPDAPRLAQLLSVIPGVVEHGLFVGMASTVVLAGADGI 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHOPA (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris GN=rpiA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.816e-35 Identity = 89/202 (44.06%), Postives = 125/202 (61.88%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGC--VAKLRTTGD-QPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STAKH V+ +GE +R G I+G+PTS+ T A GI L+ LD +D+ IDGADEVD ++L+KG GG+LLREK+V A + +VI DESKLV LG +P+EV+P+ T + LQ+ F GC KLR D FVTD G++++D L + I D + + + GVVEHG+F+ MA+TV++A G+ Sbjct: 30 STAKHFVELLGERVRLG--LEIIGVPTSEVTRADAERCGIRLTSLDEIDRLDITIDGADEVDHHLDLIKGGGGALLREKIVAAASDRMIVIADESKLVDTLG--RFPLPIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGGHWILDAQLGR-IPDAPRLAQLLSVIPGVVEHGLFVGMASTVVLAGADGI 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA1_OCEIH (Ribose-5-phosphate isomerase A 1 OS=Oceanobacillus iheyensis GN=rpiA1 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.816e-35 Identity = 85/196 (43.37%), Postives = 121/196 (61.73%), Query Frame = -2 Query: 13 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASE 600 ST + +GE ++Q L I GIP+S +T A GIPL+D + +D+ IDGADEVD +L+KG G +L REK++ A K+FV+IVD+SK+V LG ++PVEV+P+ W+ TA + L GCV +R ++P VTDNGNY++D K I + I + GV+E G+F+DMATTVIV + Sbjct: 31 STVYWMIRSLGERIQQDGL-KIEGIPSSNQTATWAEEAGIPLTDFSNVKELDITIDGADEVDANNHLIKGGGAALFREKIIAQAAKEFVIIVDQSKVVETLG--EFSLPVEVLPFSWQRTANEISKL----GCVPTVRVHEEEPLVTDNGNYILDCPFKV-IPHPDKLNKEIKSIVGVIETGLFIDMATTVIVGEK 218
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PYRKO (Ribose-5-phosphate isomerase A OS=Pyrococcus kodakaraensis GN=rpiA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.678e-35 Identity = 83/203 (40.89%), Postives = 126/203 (62.07%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLR--TTGDQPFVTDNGNYVIDLYLKK--DIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + ++ +G+LL +G+L ++ G+PTS + A+ GIP+ LD +D+A+DGADEVDP MNL+KGRG +L EK++ F+V+VDESKLV +L G + +P+EV+P W+ A+ L E A+LR D P VTDNGN+++D + D DL++ + I GVVE+G+F D+A ++V + GV Sbjct: 30 STTAYFINYLGKLLMEGELEDVYGVPTSHQARLLALEAGIPVVSLDEVDAIDIAVDGADEVDPHMNLIKGRGAALTMEKIIEYRAGMFIVLVDESKLVEYL-GQKMPVPIEVIPAAWRAIAEEL----EVFNATAELRMAVKKDGPVVTDNGNFILDAKFARIEDPLDLEIELNTI---PGVVENGIFADIADIILVGTPEGV 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_DEIRA (Ribose-5-phosphate isomerase A OS=Deinococcus radiodurans GN=rpiA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.678e-35 Identity = 84/199 (42.21%), Postives = 122/199 (61.31%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STAK+A++ +G L G+L+ IVG+ TS+ + + A +GIP LD P+ D+AIDGADE+ P ++LVKG GG+L+REKM K+ ++I D +KLV LG +P+E+VP+ + T +RL++ +LR G QP+VTDNGNY+ D L + D + I GVV+ G+FL MA VA+ GV Sbjct: 30 STAKYAIEELGRKLAAGELSGIVGVSTSEASEKLAREVGIPTEPLDPRPL-DIAIDGADEIAPNLDLVKGLGGALVREKMTEVQAKRLIIIADHTKLVTRLGEKA-PLPIEIVPFGFLSTIERLREFLPG----GRLRQPGAQPYVTDNGNYIFDAQLPAEF-DARELERRIKGTLGVVDTGLFLGMAERAFVAAPDGV 221
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_THET8 (Ribose-5-phosphate isomerase A OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=rpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.803e-35 Identity = 90/199 (45.23%), Postives = 122/199 (61.31%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA++AV + LR+G+L +VG+PTS+ T E A GIPL DL V DLAIDGADE+ P + L+KG GG+LLREK+V K+F+VI D +K VP LG +PVE+VP+ ++ T K + DL G +LR GD+ + TD G+ + D IGD +L + GVVE G+F+ MAT +VA GV Sbjct: 32 STARYAVLELARRLREGELKGVVGVPTSRATEELAKREGIPLVDLPPEGV-DLAIDGADEIAPGLALIKGMGGALLREKIVERVAKEFIVIADHTKKVPVLGRG--PVPVEIVPFGYRATLKAIADL----GGEPELRMDGDEFYFTDGGHLIADCRF-GPIGDPLGLHRALLEIPGVVETGLFVGMATRALVAGPFGV 222
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_ENTFA (Ribose-5-phosphate isomerase A OS=Enterococcus faecalis GN=rpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.803e-35 Identity = 91/199 (45.73%), Postives = 125/199 (62.81%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLR-TTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STAK VD IG +++ L+ IVG+ TSK+T +QA++LGIPL +D P VDL IDGADE+ +KG G +LL EK+V KK + IVD+SK+V LG +PVEVVPY +++L LFE+ G LR + +TD G+++IDL+L+K I D + + L GVVEHG+FL+M + VIV E G Sbjct: 27 STAKFMVDEIGRRVKEEGLS-IVGVTTSKETEKQALALGIPLKSIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKSKMVDDLG--AFPLPVEVVPY----GSRQLVHLFEEKGYHPTLRLNAAGETLITDGGHHIIDLHLEK-ITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDG 217 The following BLAST results are available for this feature:
BLAST of DC887593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887593 ID=DC887593; Name=DC887593; organism=Citrus sinensis; type=EST; length=601bpback to top |