DC887593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PROM3 (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain MIT 9303) GN=rpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.177e-31 Identity = 80/195 (41.03%), Postives = 113/195 (57.95%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQ--PFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA + +G L G+L IVG+ TS + A LGIPL +L + +DLAIDGADEVDP L+KG G ++EK+V +FVV+VD +K+V L G +PVEV+P W+ RL +L G +A LR + P VTD GN V+D+ + IGD + I L GV+E+G+F+++ V+V Sbjct: 32 STAALMIQALGAKLASGELREIVGVTTSFQGEVMAAELGIPLRNLTAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVASRADRFVVVVDSTKIVDRL-NLGFLLPVEVLPGAWRQVQGRLAEL----GGIADLRMAQCKAGPVVTDQGNLVLDVSMAGGIGDPEDLECRINNLPGVLENGLFVNLTDEVLV 221
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_SYNPW (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain WH7803) GN=rpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.374e-31 Identity = 77/193 (39.90%), Postives = 113/193 (58.55%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA + +GE L G+L++IVG+ TS + A LGIPL L++ +DLAIDGADEVDP L+KG G ++EK+V +F+V+VD +KLV L G +PVEV+P W +++L+ + D R G P VTD GN V+D+ + I D I + GV+E+G+F+++A V+V Sbjct: 32 STAALMIKGLGERLAAGQLSDIVGVTTSFQGEVLAAELGIPLRSLNAVDRIDLAIDGADEVDPAFQLIKGGGACHVQEKLVAARADRFIVVVDSTKLVERL-NLGFLLPVEVLPGAWVQISQQLKAMGGDAELRMATRKAG--PVVTDQGNLVLDVRFEGGIADPASLEKEINNIPGVLENGLFVNLADEVLV 221
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_SYNP2 (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.374e-31 Identity = 83/193 (43.01%), Postives = 111/193 (57.51%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 ST +A+ IGE L G+L NIVGIPTS + A IPLS LD+ +D+AIDGADEVDP NL+KG G + REK+V KFVV+VD KLV LG + L +PVEV+P ++L+ L ++ G P VTD GN V+DL I D I + GV+E+G+F+ +A ++V Sbjct: 31 STTAYAIQYIGERLAAGELENIVGIPTSFQAEVLAKQYKIPLSSLDAVDHIDVAIDGADEVDPQKNLIKGGGAAHTREKVVDALANKFVVVVDSGKLVDRLGSTFL-LPVEVIPMAITPVMRQLEALGGKPELRMGVKKAG--PVVTDEGNLVVDLKF-AGIDDPATLEQKINNIPGVLENGLFVGVADVILV 219
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BRUSU (Ribose-5-phosphate isomerase A OS=Brucella suis GN=rpiA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.374e-31 Identity = 77/201 (38.31%), Postives = 117/201 (58.21%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVA--KLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA+ V + E ++ G ++G+PTS++T + LG+ L+ L+ P +DL IDGADEVD ++L+KG GG+LLREK+V A +VI D+SK+V LG +P+EV + T + ++ CG LR PF+TD G+Y++D + I D K SD + + GVVEHG+F+ +A I+A G+ Sbjct: 31 STAEEFVRLLAEKVKGG--FRVIGVPTSERTAKLCEELGVALTTLEETPHLDLTIDGADEVDGELSLIKGGGGALLREKIVAAASDSMIVIADQSKVVETLG--RFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHYIVDASFGR-IPDPKTLSDALFAIPGVVEHGLFIGLARAAIIAGTDGI 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PYRFU (Ribose-5-phosphate isomerase A OS=Pyrococcus furiosus GN=rpiA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.599e-30 Identity = 74/201 (36.82%), Postives = 119/201 (59.20%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKK--DIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + + +GE++ +GK+ +I G+P K + G+P+ LD +D+A+DGADEVDP +NL+KGRG +L EK++ F+V+VDESKLV +L + +P+EV+P WK + L + ++ D P VT+NGN++ID + D D+++ + I GVVE+G+F D+A V+V ++ GV Sbjct: 30 STTAYFIRYLGEMIEKGKVEDIYGVPPPIKQKFLRMESGVPVLSLDQVDAIDIAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDESKLVDYL-CQKMPVPIEVIPAAWKAILEELS--IFNAKAELRMGVKKDGPVVTENGNFIIDAKFPRIDDPLDMEIELNTI---PGVVENGIFADIADIVLVGTKEGV 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_JANSC (Ribose-5-phosphate isomerase A OS=Jannaschia sp. (strain CCS1) GN=rpiA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.599e-30 Identity = 78/201 (38.81%), Postives = 120/201 (59.70%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFED---CGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA V +GEL+R + I G+ TS +T + A +G+ + LD +DL IDG DE DP +NL+KG GG+LL EK+V A + VVI D +K V LG +PVEV+P+ W+ T ++++ + G A LR +G +PF TD GN ++DL+L++ I S + ++ GVVE+G+FLD+ +++ + G Sbjct: 35 STAAWMVRCLGELVRDEGM-QITGVATSTRTADLARDVGVTVKTLDDVRWLDLTIDGTDEYDPNLNLIKGGGGALLHEKVVATASDQMVVIADPTKQVDTLG--AFPLPVEVIPFGWQTTKALIEEMLSNLDVLGRSASLRLSGAEPFRTDEGNLILDLHLRR-IAQPAQLSLVLNQIPGVVENGLFLDICDVLVIGNADG 231
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHIME (Ribose-5-phosphate isomerase A OS=Rhizobium meliloti GN=rpiA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.088e-30 Identity = 77/200 (38.50%), Postives = 116/200 (58.00%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKL--RTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA+ V + E + G I G+PTS++T + LG+PL LD P +DL IDGADEVD + L+KG GG+LLREK+V A + +VI DESK+V LG +P+E+ P+ T ++ G ++ R++GD F+TD G+ ++D + I D + + + GVVEHG+F+D+A+ I+A G Sbjct: 30 STAEEFVRLLAEKVASG--FQISGVPTSERTARLCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASTRMIVIADESKVVDVLG--AFKLPIEINPFGQVATRLAIEKTASRLGLAGEIVVRSSGDGVFMTDGGHLILDASFGR-IPDADALAVELNAIPGVVEHGLFIDVASMAIIAGPEG 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRMU (Ribose-5-phosphate isomerase A OS=Streptococcus mutans GN=rpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.727e-30 Identity = 87/202 (43.07%), Postives = 118/202 (58.42%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDL--KVASDNIL-RLAGVVEHGMFLDMATTVIVASELGV 600 STA + V+ +G +++ L ++G+ TS +T QA +LGIPL +D VD+ +DGADEVDP N +KG GG+LL EK+V K ++ +VDESK+V LG +PVEVV Y A+RL FE G R FVTD N++IDL D+G + +A N+L GVVEHG+F M VIVA + GV Sbjct: 28 STAYYFVEEVGRRVQEEGL-QVIGVTTSSRTTAQAQALGIPLKSIDEVDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDESKMVDTLG--AFRLPVEVVQY----GAERLFREFEKKGYKPSFREYDGVRFVTDMKNFIIDL----DLGSIPDPIAFGNMLDHQVGVVEHGLFNGMVNRVIVAGKDGV 218
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_SPHAL (Ribose-5-phosphate isomerase A OS=Sphingopyxis alaskensis GN=rpiA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.562e-30 Identity = 77/194 (39.69%), Postives = 109/194 (56.19%), Query Frame = -2 Query: 19 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVA 600 STA +AV + E ++ G I + TS+ T A+ L +PL VDL IDGADE+D +KG GG+LLREK+ A + ++I D SKLV LG +PVEVVP+ +F RL L G +R G PF+TD GNY++D L + ++A+ I + GV+EHG+FLD T+++A Sbjct: 31 STAAYAVKSLSERIKHG--LRITAVATSQATEALALRLAVPLVPFQQLSAVDLTIDGADEIDDRFQAIKGGGGALLREKITESASTRVIIIADSSKLVAQLG--KFPLPVEVVPFATEFVRARLSAL----GARVTVREAGGTPFLTDQGNYILDAALDEIPRPREIAA-AITTIPGVLEHGLFLDEIDTIMIA 215
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_TREDE (Ribose-5-phosphate isomerase A OS=Treponema denticola GN=rpiA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.652e-30 Identity = 81/203 (39.90%), Postives = 117/203 (57.64%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPV---VDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKK--DIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA AV R+ +LL GKL I +PTS +T + LGIP+ L S + +DLAIDGADE+DP NL+KG G +LL+EK++ K+FVVI DE K V + G G A+P+E++P K L+ + ++ G P VTDNGN++ID+ K D+ D K +++ ++ GVVE+G F V + + G Sbjct: 36 STAMPAVHRLAQLLSSGKLKKIYAVPTSFQTSIECEKLGIPIYSLSSQQIGGSLDLAIDGADEIDPDKNLIKGGGAALLKEKIIAYNSKEFVVIADERKKVKSM-GKGFALPIEIIPEARLSITKALEAQGIEVFLREGVKKMG--PVVTDNGNFIIDVKWPKAADV-DPKALEESLNKITGVVENGFFTKNTPRVFIVHQDG 234 The following BLAST results are available for this feature:
BLAST of DC887593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887593 ID=DC887593; Name=DC887593; organism=Citrus sinensis; type=EST; length=601bpback to top |