DC887593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRS2 (Ribose-5-phosphate isomerase A OS=Streptococcus suis (strain 98HAH33) GN=rpiA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.015e-29 Identity = 84/198 (42.42%), Postives = 112/198 (56.57%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA + V IG + + L I G+ TS T E A SLGIPL ++D VDL +DGADEVD N +KG G +LL EK+V K + IVDESK+V LG +PVEVV Y A+ L LFE G R + +TD N++IDL L++ I D ++ + R GVVEHG+F+ + + VIV + G Sbjct: 28 STAYYFVQEIGRRVAEEGL-QITGVTTSHATAEHAASLGIPLKNIDEVEYVDLTVDGADEVDGDFNGIKGGGAALLMEKVVAVNSKDCIWIVDESKMVQTLG--AFKLPVEVVQY----GAENLFRLFEKKGYRPSFRMRNGKKHITDMQNFIIDLDLRR-IEDTYALAEELDRTVGVVEHGLFIGLISKVIVGTPEG 217
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRPJ (Ribose-5-phosphate isomerase A OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=rpiA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.015e-29 Identity = 84/200 (42.00%), Postives = 114/200 (57.00%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVA-SDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA + V+ IG +++ L I+ + TS T +QA L IPL +D VD+ +DGADEVD N +KG GG+LL EK+V K+++ +VDESKLV LG +PVEVV Y A+++ FE G R Q FVTD N++IDL L D+ + +A + + GVVEHG+F M VIVA GV Sbjct: 28 STAYYFVEEIGRRIKEEGL-QIIAVTTSSVTTKQAEGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEKLG--AFKLPVEVVQY----GAEQVFRRFERAGYKPSFREKDGQRFVTDMQNFIIDLAL--DVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGV 218
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_AGRVS (Ribose-5-phosphate isomerase A OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=rpiA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.015e-29 Identity = 76/200 (38.00%), Postives = 113/200 (56.50%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGC--VAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA+ V + E + G + G+PTS++T + LG+PL LD P +DL +DGADE+D + L+KG GG+LLREK+V A + +VI DE+KLV LG +P+E+ + T ++ G LR +GD F+TD G+Y++D + I D S + + GVVEHG+F+ MA+ +VA G Sbjct: 30 STAEEFVRLLAEKVADG--FKVQGVPTSERTARLCLELGVPLMSLDELPELDLTVDGADELDRHLTLIKGGGGALLREKIVAAASSRVIVIADETKLVETLG--AYPLPIEINGFGGIATRISIEKAAAKLGLSGTIGLRMSGDDLFMTDGGHYILDASFGR-IPDAVALSQALHAIPGVVEHGLFIGMASLAVVAGSDG 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_DINSH (Ribose-5-phosphate isomerase A OS=Dinoroseobacter shibae (strain DFL 12) GN=rpiA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.938e-29 Identity = 78/201 (38.81%), Postives = 119/201 (59.20%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDC---GCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA V + E + Q + +I + TS +T E A L + ++ LD +DL IDGADE DP +NL+KG GG+LL+EK+V A + +VI D SK V LG +PVEV+ + W+ T +++ + G A LR P+VTD GN+++DL+L++ IG+ + S + +L GVVE+G+FLD+ V++ G Sbjct: 35 STAAWMVRHLAETVDQEGM-DITCVATSTRTAELARDLKLHVTTLDEVKWLDLTIDGADEFDPTLNLIKGGGGALLQEKIVATASDRMIVITDASKAVATLG--AFPLPVEVIRFGWETTRTLIEETLVNVDVGGREAILRMENGMPYVTDEGNFIVDLHLER-IGNPRQVSLVLNQLPGVVENGLFLDICDVVVIGKSDG 231
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PROMT (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain NATL2A) GN=rpiA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.144e-29 Identity = 72/193 (37.31%), Postives = 110/193 (56.99%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA ++ + ++ G++ ++VG+ TS + A LGIPL L S +DLAIDGADEV+P L+KG G ++EK+V KKF+V+VD +KLV L +PVEV+P WK K L +L + + G P VTD GN ++DL + I ++ I + GV+E+G+F+++ V+V Sbjct: 31 STAALMIEALAIKIKSGEIKDVVGVTTSFQGEVLASELGIPLKSLSSVSEIDLAIDGADEVNPKFQLIKGGGACHVQEKLVAALAKKFIVVVDSTKLVEKL-NLDFKLPVEVLPSAWKQVQKTLINLGGEGNLRMAQKKAG--PIVTDQGNLILDLTFRNGIDKPELLESQINNIPGVLENGLFVNLTDEVLV 220
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_CYAP7 (Ribose-5-phosphate isomerase A OS=Cyanothece sp. (strain PCC 7424) GN=rpiA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.144e-29 Identity = 79/193 (40.93%), Postives = 110/193 (56.99%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 ST +A+ IGE ++ G+L N+VG+PTS A G+PL+ LD +DLAIDGADEVDP NL+KG G + REK+V F+V+VD KLV LG + L +PVEV+P K L+ L ++ G P VTD GN VID+ +I D I + GV+E+G+F+ +A ++V Sbjct: 35 STTAYAIQYIGERIQTGELKNVVGVPTSFGAEVLARKYGVPLTTLDVIDKMDLAIDGADEVDPQKNLIKGGGAAHTREKIVDSLADVFIVVVDSGKLVDKLGSTFL-LPVEVIPMAVTPVIKALEKLGGKTDLRMGVKKAG--PVVTDQGNLVIDVKF-DNIEDPANLEKTINNIPGVLENGLFVGVADLILV 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BARHE (Ribose-5-phosphate isomerase A OS=Bartonella henselae GN=rpiA PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.144e-29 Identity = 74/196 (37.76%), Postives = 113/196 (57.65%), Query Frame = -2 Query: 19 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAK--LRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVA 600 ST + +GE + G + + TS+ + + G+P+S L+ P +DL IDGADE+ P M L+KG GG+LL EK+V A + VI DE+K+V LG A+P+EV P+ T ++ ++ G + LR GD PF TD G+++ D + + I K+ S+ +L + GVVEHG+FL +A+ IVA Sbjct: 30 STVNEFIPLLGERVANG--LRVTCVATSQYSEQLCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTLG--AFALPIEVNPFGIHATRIAIEKAADNLGLSGEITLRMNGDDPFKTDGGHFIFDAFWGR-ILQPKLLSEALLAIPGVVEHGLFLGLASRAIVA 220
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_SYNSC (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain CC9605) GN=rpiA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.718e-29 Identity = 78/195 (40.00%), Postives = 111/195 (56.92%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQ--PFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA + +G L G+L +IVG+ TS + A L IPL L++ +DLAIDGADEVDP L+KG G ++EK+V +FVV+VD +KLV L G +PVEV+P W+ ++L+ L G A+LR + P VTD GN V+D L I D I + GV+E+G+F+++ V+V Sbjct: 32 STAALMIQGLGAKLASGELKDIVGVTTSFQGEVLAAELNIPLLSLNAVSRIDLAIDGADEVDPGFQLIKGGGACHVQEKLVAARADRFVVVVDSTKLVDRL-NLGFLLPVEVLPGAWRQVKQQLEAL----GGSAELRMAQRKAGPVVTDQGNLVLDAKLDGGISDPVALEQTINNIPGVLENGLFVNITDEVLV 221
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRPN (Ribose-5-phosphate isomerase A OS=Streptococcus pneumoniae GN=rpiA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.718e-29 Identity = 84/200 (42.00%), Postives = 113/200 (56.50%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVA-SDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA + V+ IG +++ L I + TS T +QA L IPL +D VD+ +DGADEVD N +KG GG+LL EK+V K+++ +VDESKLV LG +PVEVV Y A+++ FE G R Q FVTD N++IDL L D+ + +A + + GVVEHG+F M VIVA GV Sbjct: 28 STAYYFVEEIGRRIKEEGL-QITAVTTSSVTSKQAEGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEKLG--AFKLPVEVVQY----GAEQVFRHFERAGYKPSFREKDGQRFVTDMQNFIIDLAL--DVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGV 218
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PROM4 (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain MIT 9211) GN=rpiA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.718e-29 Identity = 74/195 (37.95%), Postives = 112/195 (57.44%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQ--PFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA + +G + G L +IVG+ TS + A LGIPL L + +DLAIDGADEVD L+KG G ++EK+V ++FVV+VD SK+V L + +PVEV+P W+ ++ ++ G V++LR + P VTD GN V+D+ I D + I + GV+E+G+F+++A V+V Sbjct: 32 STAALMIKALGAKISSGHLKDIVGVTTSFQGEVLATELGIPLQGLSAVSQIDLAIDGADEVDSNFQLIKGGGACHVQEKLVASLAERFVVVVDSSKIVKTLNLT-FKLPVEVLPSAWQLVKNKIHEI----GGVSQLRMAQKKAGPIVTDQGNLVLDVTFAGGINDPQTLEKQINNIPGVLENGLFVNLADEVLV 221 The following BLAST results are available for this feature:
BLAST of DC887593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887593 ID=DC887593; Name=DC887593; organism=Citrus sinensis; type=EST; length=601bpback to top |