DC887593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BACSK (Ribose-5-phosphate isomerase A OS=Bacillus clausii (strain KSM-K16) GN=rpiA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.803e-35 Identity = 87/202 (43.07%), Postives = 124/202 (61.39%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLK---VASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST V +GE ++G NI + S+KT A + GI + D + +++A DGADE+ P + L+KG GGSLLREK+V A K+ VV+ DESKLV LG +PVE++P+ W+ TA R++ L G VA LR TG PFV+DN N+++D D G+++ + + +L GVVE G+FLDMA IVAS+ G+ Sbjct: 28 STVFEFVRVLGEKAKEG--LNIQAVAASRKTEALAKACGIHIIDFPTMEKLEVAFDGADEIAPGLMLLKGGGGSLLREKLVAAAAKRLVVLADESKLVEELG--AFKLPVEIIPFGWETTAMRIEAL----GGVASLRQTGKSPFVSDNHNWILDC----DFGNIRDPYSLHEKVKKLVGVVETGLFLDMACEAIVASKNGI 217
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHOP5 (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain BisA53) GN=rpiA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.273e-35 Identity = 84/202 (41.58%), Postives = 126/202 (62.38%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGC--VAKLRTTGD-QPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STAKH V+ +G ++ G +VG+PTS+ T A GIPL+ LD +DL +DGADE+DP +NLVKG GG+LLREK+V A + +VI D+SKLV LG +P+EV+P+ T + ++ CG KLR D FVTD G++++D +L + I D + + + G+VEHG+F+ +A++V++AS G+ Sbjct: 30 STAKHFVELLGAKVQGG--LQVVGVPTSEVTRADAERCGIPLATLDEVDHLDLTVDGADEIDPALNLVKGGGGALLREKIVAAASGRMIVIADDSKLVETLG--RFPLPIEVIPFGLAATRRAIEQALAVCGIDGELKLRNGKDGHAFVTDGGHWIVDAHLGR-IPDAPRLAGLLSVIPGIVEHGLFIGLASSVVLASPHGI 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRA1 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype Ia GN=rpiA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.193e-35 Identity = 89/199 (44.72%), Postives = 121/199 (60.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA V+ IG +++ L +VG+ TS +T EQA L IPL D V+D+ +DGADEVDP N +KG GG+LL EK+V K+++ +VDESKLV LG +PVEVV ++ ++RL +F+ G R T F+TD GNY+IDL LKK I D K ++ + GVVEHG+F M VIVA + G+ Sbjct: 28 STAYFFVEEIGRRVKEEGL-QVVGVTTSNRTTEQARGLAIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLG--AFKLPVEVV----RYGSERLFRVFKSKGYCPSFRETEGDRFITDMGNYIIDLDLKK-IEDPKQLANELDHTVGVVEHGLFNGMVNKVIVAGKNGL 218
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHILW (Ribose-5-phosphate isomerase A OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rpiA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.193e-35 Identity = 84/200 (42.00%), Postives = 119/200 (59.50%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAK--LRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA+ V + E + G + G+PTS++T V LG+PL LD P +DL IDGADEVDP + L+KG GG+LLREK+V A ++ +VI DESKLV LG A+P+EV P+ T ++ + G + LR +GD F TD G+++ID + I D + S + + GVVEHG+F++MA I+A G Sbjct: 30 STAEEFVRLLAEKVASG--FKVEGVPTSERTARLCVELGVPLKSLDELPALDLTIDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIADESKLVDTLG--AYALPIEVNPFGLVSTRIAIEKVAARLGLAGELSLRQSGDGEFTTDGGHHIIDASFGR-IPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAG 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_DESAA (Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rpiA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.193e-35 Identity = 95/203 (46.80%), Postives = 124/203 (61.08%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTG-DQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRL---AGVVEHGMFLDMATTVIVASELGV 600 STA A+ I L+++GKL +IVGIP+S T E A SLGIPL + + V+D+ IDGADEVDP +NL+KG GG+LLREK+V A KK ++IVDESK+ L G+ A+PVEVVP+ TA + L E G +R + F TDN N ++D D G + A + L AGVVEHG+FL VIVA G+ Sbjct: 31 STATFAIHAIARLMKEGKLKDIVGIPSSTPTEEVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIVDESKISDKL-GTIFALPVEVVPFA---TASETRFL-ESLGAKVTVRENQLGKAFKTDNHNRILD----ADFGPMDDAVKIGMALSQRAGVVEHGLFLGTTALVIVAGADGI 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PROMP (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rpiA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.070e-34 Identity = 83/195 (42.56%), Postives = 117/195 (60.00%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLR--TTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA + + E +R GKL NI G+PTS ++ A+ L IPL DL S P +DLAIDGADEVDP L+KG G +REK+V K ++++DESKLV +L +PVEV+P W K+++D+ + V+ LR T P VTD GN ++D+ I D K I + GV+E+G+F+D+A V+V Sbjct: 25 STAALMIKSLAEKIRSGKLKNIKGVPTSFQSEVLALELNIPLIDLASVPYIDLAIDGADEVDPDFQLIKGGGACHVREKLVASKANKLLIVIDESKLVQNL-NQVFPLPVEVMPSAW----KQVKDIISEMSGVSNLRMATKKAGPVVTDQGNLILDVLFDAGIRDPKDLEMRINNIPGVLENGLFVDLADKVLV 214
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PARL1 (Ribose-5-phosphate isomerase A OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpiA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.070e-34 Identity = 83/201 (41.29%), Postives = 126/201 (62.69%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGD---QPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA+H V +GE ++ G +IVG+PTS++T + A SLGIPL++LD P +D+ +DGADE+D + L+KG GG+LLREK+V A + +VI D SKLV LG +PVEV+P+ TA+++ ++ GC K+ D +PF TD+ N++ D I D S + R+ GVV++G+F+ +A IV ++ G Sbjct: 30 STAEHFVRALGEKVKAG--LDIVGVPTSERTAKLAASLGIPLTNLDDTPHLDITVDGADELDGKLRLIKGGGGALLREKIVATASDRMIVIADASKLVKTLG--SFPLPVEVIPFGSAVTARKIAEVASAHGCTGKMSRRADEYGEPFFTDSENFIYDCAF-GSIPDPDGLSAALNRIPGVVDNGLFIGIAAMAIVGTDKG 225
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BACAN (Ribose-5-phosphate isomerase A OS=Bacillus anthracis GN=rpiA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.070e-34 Identity = 76/199 (38.19%), Postives = 119/199 (59.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA + ++G+ +++G +I +PTSK+T A L IPL L+ +DL IDGADE+D + L+KG GG+LLREK+V + K+ ++IVDESK+V LG +P+E++P+ WK T ++Q L GC LR ++ F+TDN N +ID I + + GVVE G+F++M + I+ ++ G+ Sbjct: 27 STAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESKVVTRLG--TFPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIIDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGI 217
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BACHK (Ribose-5-phosphate isomerase A OS=Bacillus thuringiensis subsp. konkukian GN=rpiA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.397e-34 Identity = 75/199 (37.69%), Postives = 119/199 (59.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA + ++G+ +++G +I +PTSK+T A L IPL L+ +DL IDGADE+D + L+KG GG+LLREK+V + K+ ++IVDESK+V LG +P+E++P+ WK T ++Q L GC LR ++ F+TDN N ++D I + + GVVE G+F++M + I+ ++ G+ Sbjct: 27 STAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESKVVTRLG--TFPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIVDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGI 217
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BACCZ (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ZK / E33L) GN=rpiA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.397e-34 Identity = 75/199 (37.69%), Postives = 119/199 (59.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA + ++G+ +++G +I +PTSK+T A L IPL L+ +DL IDGADE+D + L+KG GG+LLREK+V + K+ ++I+DESK+V LG +P+E++P+ WK T ++Q L GC LR ++ F+TDN N +ID I + + GVVE G+F++M + I+ ++ G+ Sbjct: 27 STAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIIDESKVVTRLG--TFPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIIDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGI 217 The following BLAST results are available for this feature:
BLAST of DC887593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887593 ID=DC887593; Name=DC887593; organism=Citrus sinensis; type=EST; length=601bpback to top |