DC887593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STAEQ (Ribose-5-phosphate isomerase A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpiA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.636e-33 Identity = 84/199 (42.21%), Postives = 124/199 (62.31%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + + +I EL++Q T I G+ TS KT A L + + D++ +DLAIDGADEVD +NL+KG GG+L REK++ +FVV+VDESKLV +LG + A+PVEV + W AK+++ ++ R D PF+TDNGNY++D L+ I ++ + ++ L GV+E G FLD+A VIV ++ GV Sbjct: 31 STIELLIPQIAELIQQKNYT-ITGVCTSNKTAFLAKELAMNIVDVNDVEKIDLAIDGADEVDSALNLIKGGGGALFREKVIDEMADRFVVVVDESKLVNYLGET-FALPVEVDKFNWYQVAKKIERTYD---IHVSRRVNEDVPFITDNGNYILDCSLQNRIPAYEL-HEFLIHLTGVLETGYFLDIADQVIVGTQEGV 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHOPS (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain BisB5) GN=rpiA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.636e-33 Identity = 80/202 (39.60%), Postives = 123/202 (60.89%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQ---PFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA+H V+ +GE +R G +++G+PTS+ T A GI L+ LD +DL +DGADEVD + L+KG GG+LLREK+V A + +VI DESK V LG +PVEV+P+ T + ++ F G +L+ + FVTD G++++D +L + I D + + + GVVEHG+F+ +A+TV++A G+ Sbjct: 30 STARHFVELLGEKVRGG--LDVIGVPTSEVTRADAERCGIRLTTLDEIDRLDLTVDGADEVDTRLELIKGGGGALLREKIVAAASDRMIVIADESKWVDCLG--KFPLPVEVIPFGLAATRRAIEKAFTQVGAAGQLKLRDGEAGHAFVTDGGHWIVDAHLGR-IPDAPRLAKLLSEIPGVVEHGLFIGIASTVVLAGTEGI 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHOS4 (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rpiA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.442e-33 Identity = 82/196 (41.84%), Postives = 123/196 (62.76%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAK---LRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA V + E +R+ L + G+PTS +T E A +LGI + LD +DL IDGADE D NL+KG G +LL+EK+V A + VVI D +K V HLG +PVEV+P+ W+ T +++ E + + LR +GD P +TD NY++DL+LK+ IG+ + + + ++AGVVE+G+F+D+ TV+V Sbjct: 35 STAAWMVRCLAERVREEGL-RVQGVPTSTRTAELARALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIADAAKEVAHLG--AFPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDAPLLTDEKNYILDLHLKR-IGEPRPLALALNQIAGVVENGLFIDICDTVVV 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHOP2 (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain HaA2) GN=rpiA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.442e-33 Identity = 80/202 (39.60%), Postives = 123/202 (60.89%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRT---TGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STAKH V+ +GE +R G +++G+PTS+ T A GI L+ LD +DL +DGADE+DP + L+KG GG+LLREK+V A + +VI DE+K V LG +PVEV+P+ T + ++ + G +L+ FVTD G+++ID +L + I D + + + GVVEHG+F+ +A+TV++A G+ Sbjct: 30 STAKHFVELLGEKVRAG--LDVIGVPTSEVTRADAERCGIRLTTLDEIDRLDLTVDGADEIDPRLELIKGGGGALLREKIVAAASDRMIVIADETKWVDCLG--HFPLPVEVIPFGLAATRRAIEQACAEVGASGRLQLREGKDGHAFVTDGGHWIIDAHLGR-IPDAPRLAQLLSAIPGVVEHGLFIGIASTVVLAGTDGI 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRS7 (Ribose-5-phosphate isomerase A OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.496e-33 Identity = 88/203 (43.35%), Postives = 120/203 (59.11%), Query Frame = -2 Query: 1 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASD---NILRLAGVVEHGMFLDMATTVIVASELGVT 600 STA + V+ IG +++ L +VG+ TS T +QA LGIPL+ +D +DL +DGADEVD N +KG G +LL EK+V K+++ +VDESKLV HLG +PVEVV Y A RL +FE G R GD+ +TD N++IDL D+G ++ D + + GVVEHG+F M VIVA + GVT Sbjct: 28 STAYYFVEEIGRRIKEEGL-QVVGVTTSSVTTKQAEGLGIPLTSIDDIDCIDLTVDGADEVDKAFNGIKGGGAALLMEKIVATPTKEYIWVVDESKLVDHLG--AFKLPVEVVQY----GADRLFRVFERAGYKPSFRMKGDKRLITDMQNFIIDL----DLGCIENPFDFGRLLDQTVGVVEHGLFNGMVDKVIVAGQAGVT 219
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHOSK (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=rpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.496e-33 Identity = 82/196 (41.84%), Postives = 122/196 (62.24%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAK---LRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA V + E +R+ L + G+PTS +T E A +LGI + LD +DL IDGADE D NL+KG G +LL+EK+V A + VVI D +K V HLG +PVEV+P+ W+ T +++ E + + LR +GD P +TD NY++DL+LK+ IG+ + + ++AGVVE+G+F+D+ TV+V Sbjct: 35 STAAWMVRCLAERVREEGL-RVQGVPTSTRTAELARALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIADAAKEVAHLG--AFPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDAPLLTDEKNYILDLHLKR-IGEPRKLGLALNQIAGVVENGLFIDICDTVVV 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHOS1 (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rpiA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.496e-33 Identity = 82/196 (41.84%), Postives = 122/196 (62.24%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAK---LRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA V + E +R+ L + G+PTS +T E A +LGI + LD +DL IDGADE D NL+KG G +LL+EK+V A + VVI D +K V HLG +PVEV+P+ W+ T +++ E + + LR +GD P +TD NY++DL+LK+ IG+ + + ++AGVVE+G+F+D+ TV+V Sbjct: 35 STAAWMVRCLAERVREEGL-RVQGVPTSTRTAELARALGIQVVTLDEAKWLDLTIDGADEFDADFNLIKGGGAALLQEKIVATASDRMVVIADAAKEVAHLG--AFPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDAPLLTDEKNYILDLHLKR-IGEPRQLGLALNQIAGVVENGLFIDICDTVVV 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRT1 (Ribose-5-phosphate isomerase A OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rpiA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.871e-33 Identity = 91/201 (45.27%), Postives = 121/201 (60.20%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTT--GDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA V+ IG +++ L+ +VG+ TS +T +QA LGIPL +D +D+ +DGADEVDP +N +KG GG+LL EK+V KK++ +VDESK+V LG +PVEVV Y A RL FE G R T GD+ FVTD N++IDL L K I + D + + GVVEHG+F M VIVA + GV Sbjct: 28 STAYFFVEEIGRRIKEEGLS-VVGVTTSSQTTKQAEGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDESKMVDQLG--AFKLPVEVVQY----GADRLYLDFESKGYKPSFRVTEQGDR-FVTDMKNFIIDLDLGK-INNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGV 219
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRPC (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rpiA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.871e-33 Identity = 92/202 (45.54%), Postives = 119/202 (58.91%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLK--VASDNIL-RLAGVVEHGMFLDMATTVIVASELGV 600 STA + V+ IG ++Q L +VG+ TS T +QA LGIPL +D +DL +DGADEVD N +KG G +LL EK+V K+++ +VD SK+V HLG +PVEVV Y A RL +FE G R GD VTD NY+IDL D+G +K VA ++L GVVEHG+F M VIVAS+ GV Sbjct: 28 STAYYFVEEIGRRVKQEGL-QVVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVEHLG--AFKLPVEVVQY----GADRLFRVFEKAGYKPSFRMKGDSRLVTDMQNYIIDL----DLGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDGV 218
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRPB (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rpiA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.871e-33 Identity = 92/202 (45.54%), Postives = 119/202 (58.91%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLK--VASDNIL-RLAGVVEHGMFLDMATTVIVASELGV 600 STA + V+ IG ++Q L +VG+ TS T +QA LGIPL +D +DL +DGADEVD N +KG G +LL EK+V K+++ +VD SK+V HLG +PVEVV Y A RL +FE G R GD VTD NY+IDL D+G +K VA ++L GVVEHG+F M VIVAS+ GV Sbjct: 28 STAYYFVEEIGRRVKQEGL-QVVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGADEVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVEHLG--AFKLPVEVVQY----GADRLFRVFEKAGYKPSFRMKGDSRLVTDMQNYIIDL----DLGCIKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDGV 218 The following BLAST results are available for this feature:
BLAST of DC887593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887593 ID=DC887593; Name=DC887593; organism=Citrus sinensis; type=EST; length=601bpback to top |