DC887593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_AGRRK (Ribose-5-phosphate isomerase A OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rpiA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.492e-32 Identity = 82/200 (41.00%), Postives = 119/200 (59.50%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGC--VAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA+ V + E + G + I G+PTS++T V LG+PL LD P +DL IDGADEVD + L+KG GG+LLREK+V + ++ +VI DESK+V LG A+P+EV P+ T +++ G LR + D F+TD G+++ID + I D + S + + GVVEHG+F++MAT I+A G Sbjct: 30 STAEEFVRLLAEKVAAGLV--IEGVPTSERTARLCVDLGVPLKSLDELPELDLTIDGADEVDGALRLIKGGGGALLREKIVAASSQRMIVIADESKVVQTLG--AFALPIEVNPFGLVSTRIQIEKTAARLGLSGALNLRQSEDGNFMTDGGHFIIDASFGR-IPDAEALSIALNSIPGVVEHGLFINMATLAIIAGPSG 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA2_OCEIH (Ribose-5-phosphate isomerase A 2 OS=Oceanobacillus iheyensis GN=rpiA2 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.492e-32 Identity = 80/194 (41.24%), Postives = 114/194 (58.76%), Query Frame = -2 Query: 19 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVA 600 ST + + +R+ +L +VGIP SKK+ A LGIPL+ +Y VD+AIDG DE+D + LVKG GGSL+REKM+ + F+VI K + LG +PVEVVP+ W+ T +RLQ GC LR + FV+DN NY+ID K+I D + ++ ++ GV+E G+F++M IVA Sbjct: 29 STVNEFLYCLAARMRKERL-QVVGIPASKKSERLATELGIPLTTFATYQNVDIAIDGTDEIDDQLYLVKGGGGSLVREKMIDLVAETFIVIASGKKKIKKLG--SFPVPVEVVPFGWQATEQRLQQF----GCQTNLRMVEEDIFVSDNQNYIIDCDF-KEIDDAEALHRSLKQIVGVIETGIFINMVDKAIVA 214
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STAHJ (Ribose-5-phosphate isomerase A OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpiA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.478e-32 Identity = 84/199 (42.21%), Postives = 124/199 (62.31%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + + ++ E + + +L NI G+ TS K+ A L I + D++ VDLAIDGADEVD +NL+KG GG+L REK++ +FVV+ DESKLV +LG S +PVEV + W AK++ + F+D + + R + D PF+TDNGNY++D L K I D + ++ L GV+E G FL++ VIV ++ GV Sbjct: 31 STIELLIPKLAERIHKEQL-NITGVCTSNKSAFIAKKLDINVVDINDVGHVDLAIDGADEVDVNINLIKGGGGALFREKVIDEMAHRFVVLADESKLVNYLGES-FKLPVEVDKFNWFHIAKKI-EAFDD--IITERRMSDDVPFITDNGNYILDCQLNKQI-DPYQFHEYLIHLTGVLETGYFLNITDQVIVGTQDGV 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_SILST (Ribose-5-phosphate isomerase A OS=Silicibacter sp. (strain TM1040) GN=rpiA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.478e-32 Identity = 79/196 (40.31%), Postives = 124/196 (63.27%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDL---FEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA V +GE++R+ L I G+PTS +T E A +GI L LD +DL IDGADE D +NL+KG GG+LL+EK+V A + VVI D++K V LG +P+EV+P+ W+ + +++ + G + LR G P+VTD GN+++DL+L + IG+ + + + ++ GVVE+G+F+D+ TV++ Sbjct: 35 STAAWLVRCLGEMVREDGL-KITGVPTSARTAELAREVGIELITLDEARWLDLTIDGADEFDSELNLIKGGGGALLQEKIVATASDQMVVIADKAKEVETLG--AFPLPIEVIPFGWQTSQALVEETLISMDVMGRSSTLRMNGASPYVTDEGNHILDLHLNR-IGNPRQLALVLNQIPGVVENGLFIDICDTVVI 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_ROSCS (Ribose-5-phosphate isomerase A OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rpiA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.478e-32 Identity = 82/200 (41.00%), Postives = 116/200 (58.00%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTT-GDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA + + L G+L +VG+PTS++T A LGIPL+ LD +P +DLA+DGADE+DP + L+KG GG++LREK+V + +FVV+ SK V LG +PVEVV + +RL L G LR PFVTD GN ++D + I D + + I + GVV HG+FL MA+ ++A G+ Sbjct: 30 STASFMLRGLAARLADGRLQRVVGVPTSEQTAVLARELGIPLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKRVERLGERS-PLPVEVVTFGMPLCIRRLAAL----GGEPVLRCDHSGAPFVTDEGNLILDCHFGV-IADPEALAAAICAIPGVVAHGLFLGMASLAVIAGPDGI 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_METRJ (Ribose-5-phosphate isomerase A OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=rpiA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.478e-32 Identity = 87/198 (43.94%), Postives = 118/198 (59.60%), Query Frame = -2 Query: 16 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCV--AKLRTTGD-QPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVAS 600 STA V +GE +R G +IVG+PTS+ T QA SLGI L+ LD P +DL IDGADEVD + L+KG G +LLREK+V A ++ VVI D +K V LG +PVEV P+ K T + ++ GC +LR D +P VTD G+Y++D L I D + + + GVVEHG+FL +A I+A+ Sbjct: 30 STAAAFVALLGERVRAG--LDIVGVPTSEATRAQAESLGIRLATLDEQPELDLTIDGADEVDDRLRLIKGGGAALLREKIVACASRRMVVIADAAKHVARLG--AFPLPVEVNPFGLKATHRAVEAAVAGAGCSGDVRLRAQADGKPLVTDGGHYILDARLGA-IPDPEALGAALWAVPGVVEHGLFLGIADAAILAA 222
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_METB6 (Ribose-5-phosphate isomerase A OS=Methanoregula boonei (strain 6A8) GN=rpiA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.107e-31 Identity = 80/200 (40.00%), Postives = 120/200 (60.00%), Query Frame = -2 Query: 13 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLR--TTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMA--TTVIVASE 600 ST +A++ + +R G ++VG+PTS +T +A GIPL+ LD PV+DLAIDGAD+ DP L+KGRG ++ REK V A +F+V+VDE+K+V L G +PVE +P+ K +L+ L GC +R D P +TDNGN+++D ++I D + I + GV+E G+F + TT+IV +E Sbjct: 35 STVFYAIECLSGRIRDG--LSVVGVPTSYQTAMKAREYGIPLTTLDDNPVLDLAIDGADQADPQFRLIKGRGAAITREKCVASAAFRFIVVVDEAKMVKKLAG---VVPVETLPFATKTALAQLRGL----GCRPFIREAVKKDGPVITDNGNFIVDCQF-EEIPDPALLEAGIAAIPGVIESGLFTRLTGNTTIIVGNE 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STAAW (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain MW2) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.889e-31 Identity = 78/199 (39.20%), Postives = 121/199 (60.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + + ++ +L+++ + NI G+ TS K A LGI + +++ +DLAIDGADEVDP +N++KG GG+L REK++ +FVV+VDE+K+V +LG + +PVEV + W ++++ + + R D F+TDNGNY++D L K I K + ++ L GV E G FLDMA VIV ++ GV Sbjct: 31 STMELLLPQMAQLIKE-RGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGET-FKLPVEVDKFNWYHILRKIESYAD---IKVERRVNEDVAFITDNGNYILDCKLPKGIDPYKF-HEYLIHLTGVFETGYFLDMADQVIVGTQEGV 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STAAS (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain MSSA476) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.889e-31 Identity = 78/199 (39.20%), Postives = 121/199 (60.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + + ++ +L+++ + NI G+ TS K A LGI + +++ +DLAIDGADEVDP +N++KG GG+L REK++ +FVV+VDE+K+V +LG + +PVEV + W ++++ + + R D F+TDNGNY++D L K I K + ++ L GV E G FLDMA VIV ++ GV Sbjct: 31 STMELLLPQMAQLIKE-RGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGET-FKLPVEVDKFNWYHILRKIESYAD---IKVERRVNEDVAFITDNGNYILDCKLPKGIDPYKF-HEYLIHLTGVFETGYFLDMADQVIVGTQEGV 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STAAR (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain MRSA252) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.889e-31 Identity = 78/199 (39.20%), Postives = 121/199 (60.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + + ++ +L+++ + NI G+ TS K A LGI + +++ +DLAIDGADEVDP +N++KG GG+L REK++ +FVV+VDE+K+V +LG + +PVEV + W ++++ + + R D F+TDNGNY++D L K I K + ++ L GV E G FLDMA VIV ++ GV Sbjct: 31 STMELLLPQMAQLIKE-RGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKMVQYLGET-FKLPVEVDKFNWYHILRKIESYAD---IKVERRVNEDVAFITDNGNYILDCKLPKGIDPYKF-HEYLIHLTGVFETGYFLDMADQVIVGTQEGV 223 The following BLAST results are available for this feature:
BLAST of DC887593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887593 ID=DC887593; Name=DC887593; organism=Citrus sinensis; type=EST; length=601bpback to top |