DC887593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STAAN (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain N315) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.889e-31 Identity = 78/199 (39.20%), Postives = 121/199 (60.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + + ++ +L+++ + NI G+ TS K A LGI + +++ +DLAIDGADEVDP +N++KG GG+L REK++ +FVV+VDE+K+V +LG + +PVEV + W ++++ + + R D F+TDNGNY++D L K I K + ++ L GV E G FLDMA VIV ++ GV Sbjct: 31 STMELLLPQMAQLIKE-RGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGET-FKLPVEVDKFNWYHILRKIESYAD---IKVERRVNEDVAFITDNGNYILDCKLPKGIDPYKF-HEYLIHLTGVFETGYFLDMADQVIVGTQEGV 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STAAM (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.889e-31 Identity = 78/199 (39.20%), Postives = 121/199 (60.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + + ++ +L+++ + NI G+ TS K A LGI + +++ +DLAIDGADEVDP +N++KG GG+L REK++ +FVV+VDE+K+V +LG + +PVEV + W ++++ + + R D F+TDNGNY++D L K I K + ++ L GV E G FLDMA VIV ++ GV Sbjct: 31 STMELLLPQMAQLIKE-RGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGET-FKLPVEVDKFNWYHILRKIESYAD---IKVERRVNEDVAFITDNGNYILDCKLPKGIDPYKF-HEYLIHLTGVFETGYFLDMADQVIVGTQEGV 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRU0 (Ribose-5-phosphate isomerase A OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.467e-31 Identity = 87/199 (43.72%), Postives = 116/199 (58.29%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA V+ IG + + L +VG+ TS T +QA SLGIPL +D +DL +DGADEVD N +KG G +LL EK+V K+++ +VDESK+V LG +PVEVV Y A+RL +FE G R DQ +TD GN++IDL LK + A + + + GVVEHG+F M VIVA + GV Sbjct: 28 STAYFFVEEIGRRVNEEGL-QVVGVTTSSATTKQAESLGIPLKAVDEIDEIDLTVDGADEVDKEFNGIKGGGAALLMEKIVATPTKEYIWVVDESKMVEKLG--AFKLPVEVVQY----GAERLFRVFEKAGYNPSFRMKEDQKLITDMGNFIIDLDLKVIEKPFEFA-EMLDKTVGVVEHGLFNGMVHKVIVAGKDGV 218
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STRGC (Ribose-5-phosphate isomerase A OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.467e-31 Identity = 84/199 (42.21%), Postives = 116/199 (58.29%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA + V+ IG +++ L I+ + TS T +QA LGIPL +D +VD+ +DGADEVDP N +KG GG+LL EK+V K ++ +VDESKLV LG +PVEVV Y A+++ FE G R Q FVTD N++IDL L ++ A + + + G+VEHG+F M VIVA + GV Sbjct: 28 STAYYFVEEIGRRIKEEGL-QIIAVTTSSVTSQQAEGLGIPLKSIDEVDLVDVTVDGADEVDPNFNGIKGGGGALLMEKVVATPTKSYIWVVDESKLVEKLG--AFKLPVEVVQY----GAEQVFRRFERAGYKPAFRQKDGQRFVTDMKNFIIDLDLGVIENPIEFARE-LDHIVGIVEHGLFNQMVDKVIVAGKAGV 218
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_ROSDO (Ribose-5-phosphate isomerase A OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.467e-31 Identity = 81/196 (41.33%), Postives = 120/196 (61.22%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDL---FEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA V +G+ +R L I G+PTS +T E A +GI + LD+ +DL IDGADE D NL+KG GG+LL EK+V + + VVI D K V LG +P+EV+P+ + T + + + G + LR GD+PFVTD GN++IDL+LK+ IGD + + + ++ GVVE+G+F+D+ TV++ Sbjct: 35 STAAWLVRCLGQRVRNEGL-QITGVPTSTRTAELAREVGIDIITLDAAKRLDLTIDGADEFDGAFNLIKGGGGALLHEKVVAASSDRMVVIADVGKEVETLG--AFPLPIEVIPFGLQTTHALVDETLVSMDVLGRDSSLRMDGDKPFVTDEGNHIIDLHLKR-IGDARQLALTLNQVPGVVENGLFIDICDTVVL 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_LISMO (Ribose-5-phosphate isomerase A OS=Listeria monocytogenes GN=rpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.467e-31 Identity = 73/198 (36.87%), Postives = 124/198 (62.63%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 ST + ++++GE++ G +I G+ TS++T++QA +LGIPL L+ +D+ IDGADE+D +KG GG+LLREKMV A K + +V E KLV +LG +P+EV+P+ WK ++L+ E + +++G + +VT+NGNY++D+ + + D ++ + + ++ G+VEHG+FL +I A G Sbjct: 28 STVYYTIEKLGEMVNNG--LHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLG--KFPLPLEVIPFGWKQVERKLEK--EHIQTNLRKQSSG-EVYVTNNGNYILDI-VNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANG 217
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_LISMF (Ribose-5-phosphate isomerase A OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.467e-31 Identity = 72/198 (36.36%), Postives = 123/198 (62.12%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 ST + ++++GE++ G +I G+ TS++T +QA +LGIPL L+ +D+ IDGADE+D +KG GG+LLREKMV A K + +V E KLV +LG +P+EV+P+ WK + L+ E + + +++G + +VT+NGNY++D+ + + D ++ + + ++ G+VEHG+FL ++ A G Sbjct: 28 STVYYTIEKLGEMVNNG--LHITGVATSEETSKQAQNLGIPLKSLNDVAEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLG--KFPLPIEVIPFGWKQIERTLEK--EHIQTILRRQSSG-EIYVTNNGNYILDI-VNQTFRDAEMWQEKLAQIPGIVEHGLFLHYVDIIVCAKANG 217
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_LISMC (Ribose-5-phosphate isomerase A OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rpiA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.467e-31 Identity = 72/198 (36.36%), Postives = 123/198 (62.12%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 ST + ++++GE++ G +I G+ TS++T +QA +LGIPL L+ +D+ IDGADE+D +KG GG+LLREKMV A K + +V E KLV +LG +P+EV+P+ WK + L+ E + + +++G + +VT+NGNY++D+ + + D ++ + + ++ G+VEHG+FL ++ A G Sbjct: 28 STVYYTIEKLGEMVNNG--LHITGVATSEETSKQAQNLGIPLKSLNDVAEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLG--KFPLPIEVIPFGWKQIERTLEK--EHVQTILRRQSSG-EIYVTNNGNYILDI-VNQTFRDAEMWQEKLAQIPGIVEHGLFLHYVDIIVCAKANG 217
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_STAAC (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain COL) GN=rpiA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.222e-31 Identity = 78/199 (39.20%), Postives = 121/199 (60.80%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + + ++ +L+++ + NI G+ TS K A LGI + +++ +DLAIDGADEVDP +N++KG GG+L REK++ +FVV+VDE+K+V +LG + +PVEV + W ++++ + + R D F+TDNGNY++D L K I K + ++ L GV E G FLDMA VIV ++ GV Sbjct: 31 STMELLLPQMAQLIKE-RGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGET-FKLPVEVDKFNWYQILRKIESYAD---IKVERRVNEDVAFITDNGNYILDCKLPKGIDPYKF-HEYLIHLTGVFETGYFLDMADQVIVGTQEGV 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHISN (Ribose-5-phosphate isomerase A OS=Rhizobium sp. (strain NGR234) GN=rpiA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.222e-31 Identity = 80/200 (40.00%), Postives = 116/200 (58.00%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAK--LRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA+ V + E + G I G+PTS++T + LG+PL LD P +DL IDGADEVD + L+KG GG+LLREK+V A ++ +VI DESK+V LG +P+EV + T ++ + G LR +GD PF+TD G+ ++D + I D + + + + GVVEHG+FL MA+ I+A G Sbjct: 30 STAEEFVRLLAEKVASG--FQIQGVPTSERTARLCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASERMIVIADESKVVDVLG--AFKLPIEVNQFGLTTTRLAIEKVAARLGLTGDIGLRASGDGPFMTDGGHLILDASFGR-IPDAEALAAGLNAIPGVVEHGLFLGMASLAIIAGPEG 224 The following BLAST results are available for this feature:
BLAST of DC887593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887593 ID=DC887593; Name=DC887593; organism=Citrus sinensis; type=EST; length=601bpback to top |