DC887593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_THEEB (Ribose-5-phosphate isomerase A OS=Thermosynechococcus elongatus (strain BP-1) GN=rpiA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.208e-31 Identity = 83/195 (42.56%), Postives = 117/195 (60.00%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLR--TTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 ST + +G+ LR+G+L+NIVG+PTS + A GIPL LD +D+AIDGADEVDP NL+KG G + REK+V ++F+V+VD SKLV L GS +PVEV+P+ + L+ L G +LR D P VTD GN+V+D+ DI D I + GVVE+G+F+++A ++V Sbjct: 33 STTAFVIQFLGDRLRKGELSNIVGVPTSFQASVLAKKYGIPLVTLDDVEKLDIAIDGADEVDPAKNLIKGGGAAHTREKIVDSLAEQFLVVVDSSKLVQKL-GSTFPVPVEVLPFAVAPVTRALKAL----GGEPELRMGVKKDGPVVTDQGNFVLDVRF-DDIPDPAELEKAINNIPGVVENGLFVNVADVILV 221
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BRUME (Ribose-5-phosphate isomerase A OS=Brucella melitensis GN=rpiA PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.208e-31 Identity = 77/201 (38.31%), Postives = 118/201 (58.71%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVA--KLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 STA+ V + E ++ G ++G+PTS++T + LG+ L+ L+ P +DL IDGADEVD ++L+KG GG+LLREK+V A +VI D+SK+V LG +P+EV + T + ++ CG LR PF+TD G+Y++D + I D K SD + + GVVEHG+F+++A I+A G+ Sbjct: 31 STAEEFVRLLAEKVKGG--FRVIGVPTSERTAKLCEELGVALTTLEETPHLDLTIDGADEVDGELSLIKGGGGALLREKIVAAASDSMIVIADQSKVVETLG--RFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHYIVDASFGR-IPDPKTLSDALFAIPGVVEHGLFIELARAAIIAGTDGI 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_SINMW (Ribose-5-phosphate isomerase A OS=Sinorhizobium medicae (strain WSM419) GN=rpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 78/200 (39.00%), Postives = 116/200 (58.00%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKL--RTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA+ V + E + G I G+PTS++T + LG+PL LD P +DL IDGADEVD + L+KG GG+LLREK+V A + +VI DE+K+V LG +P+EV P+ T ++ + G + R +GD PF+TD G+ ++D + I D + + + GVVEHG+F++MA+ I+A G Sbjct: 30 STAEEFVRVLAEKVASG--FQISGVPTSERTARLCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASARMIVIADETKVVDVLG--AFKLPIEVNPFGQLATRLAIEKVASRLGLTGDIVVRASGDGPFMTDGGHLILDASFGR-IPDADALAVELNAIPGVVEHGLFIEMASMAIIAGPEG 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_RHOS5 (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 79/196 (40.31%), Postives = 119/196 (60.71%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDL---FEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA V + E +R+ L + G+PTS +T E A LGIP+ LD +DL IDGADE D NL+KG G +LL+EK+V A + +VI D +K V LG +PVEV+P+ W+ T +++ + G LR +G+ P +TD NY++DL+L + IG + + + ++AGVVE+G+F+D+ TV+V Sbjct: 35 STAAWMVRCLAERVREEGL-RVQGVPTSSRTAELARELGIPVVTLDEARWLDLTIDGADEFDSEFNLIKGGGAALLQEKIVATASDRMIVIADAAKEVAQLG--AFPLPVEVIPFGWQSTRMLIEEALIGLDVLGREVTLRRSGEAPLLTDEKNYILDLHLTR-IGHPRQLALTLNQIAGVVENGLFIDICDTVVV 226
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PROMM (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain MIT 9313) GN=rpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 80/195 (41.03%), Postives = 114/195 (58.46%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQ--PFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA + +G L G+L +IVG+ TS + A LGIPL +L + +DLAIDGADEVDP L+KG G ++EK+V +FVV+VD +K+V L G +PVEV+P W+ RL +L G +A LR + P VTD GN V+D+ + IGD + I L GV+E+G+F+++ V+V Sbjct: 32 STAALMIQALGAKLASGELRDIVGVTTSFQGEVMAAELGIPLRNLTAVDRIDLAIDGADEVDPSFQLIKGGGACHVQEKLVASRADRFVVVVDSTKIVDRL-NLGFLLPVEVLPGAWRQVQGRLAEL----GGIADLRMAQCKAGPVVTDQGNLVLDVSMAGGIGDPEDLECRINNLPGVLENGLFVNLTDEVLV 221
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PROMA (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus GN=rpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 78/195 (40.00%), Postives = 109/195 (55.90%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQ--PFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA + +GE L++G L I+G+PTS + A LGIPL + +DLAIDGADEVDP L+KG G ++EK+V +FVV+VD +K+V L +PVEV+P WK K L DL G + LR + P VTD GN V+D+ I D + I GV+E+G+F+++ V+V Sbjct: 32 STAALMIKSLGEKLKEGSLKEIIGVPTSFQGEVLASQLGIPLRAFSAVSKIDLAIDGADEVDPNFQLIKGGGACHVQEKLVASIADRFVVVVDSTKIVEKL-NLEFKLPVEVLPAAWKLVQKELNDL----GAKSDLRMAEKKAGPIVTDQGNLVLDVQFADGISDPQNLEKQINNFPGVLENGLFVNLTDEVLV 221
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PROM9 (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain MIT 9312) GN=rpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 77/195 (39.49%), Postives = 115/195 (58.97%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLR--TTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA + + + +R GKL NI G+ TS ++ A+ L IPL DL S +DLAIDGADEVDP L+KG G +REK+V + +++VDE+KLV L S +PVEV+P W K++Q++ + ++ LR T P VTD GN ++D+ I + K +I + GV+E+G+F+D+ V+V Sbjct: 31 STAVLMIKSLADAIRSGKLQNIKGVATSFQSEVLALELDIPLIDLASVSQIDLAIDGADEVDPGFQLIKGGGACHVREKLVASKANQLLIVVDETKLVRKLNQS-FPLPVEVLPNAW----KQVQEVISEMNGISTLRMATKKAGPVVTDQGNLILDVLFNDGIKNPKDIEKSINNIPGVLENGLFIDLTDKVLV 220
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PEDPA (Ribose-5-phosphate isomerase A OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 88/202 (43.56%), Postives = 119/202 (58.91%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFV-TDNGNYVIDLYLKKDIGDLK---VASDNILRLAGVVEHGMFLDMATTVIVASELG 600 ST K VD +GE ++ L NIVG+PTS +T EQA SLGI + +D +DL IDGADE+ +KG G + L EK+V KK + IVDESK+V HLG +P+EV+PY K K+L E G + R +V TD+ NYVIDL+L G++K +D +++ G+VE G+FLDM TVIV + G Sbjct: 30 STVKFMVDALGERVKNENL-NIVGVPTSDRTAEQARSLGINVKSVDEVDHIDLTIDGADEISSDFQGIKGGGAAHLFEKIVATNSKKVMWIVDESKMVDHLG--AFPLPLEVIPYGSKQVFKKL----EKEGLHPEFRKNDAGEYVLTDSKNYVIDLHL----GEIKHPHQLADYLIKQVGIVEQGLFLDMVNTVIVGRQNG 220
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_AGRT5 (Ribose-5-phosphate isomerase A OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpiA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31 Identity = 78/200 (39.00%), Postives = 118/200 (59.00%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKL--RTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA+ V + E + G + G+PTS++T V LG+PL LD P +DL IDGADEVD + LVKG GG+LLREK+V A + +VI D+SK+V LG +P+E+ P+ T ++ L G +L R++GD F+TD G+ ++D + I D + + + + GVVEHG+F+++A+ I+A G Sbjct: 30 STAEEFVRLLAEKVAAG--LKVEGVPTSERTARLCVELGVPLKSLDELPELDLTIDGADEVDHVLRLVKGGGGALLREKIVAAASGRMIVIADQSKVVETLG--AFPLPIEINPFGQVATRIAIEKLAARSGLSGELTMRSSGDGAFMTDGGHLILDASFGR-IPDAEALARELNTIPGVVEHGLFINLASLAIIAGPEG 224
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_SYNR3 (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain RCC307) GN=rpiA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.177e-31 Identity = 81/195 (41.54%), Postives = 112/195 (57.44%), Query Frame = -2 Query: 22 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQ--PFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIV 600 STA + +G LR G+LT+IVG+ TS + A LGIPL L++ +DLAIDGADEVDP L+KG G ++EK+V ++FVV+VD +KLV L G +PVEV+ W+ LQ L G A+LR + P VTD GN V+D+ I D I + GV+E+G+F+ +A V+V Sbjct: 32 STAALMIQEVGARLRDGRLTDIVGVTTSFQGEVLAAELGIPLQSLNAIDRIDLAIDGADEVDPAFELIKGGGACHVQEKLVARRAERFVVVVDSTKLVERL-NLGFLLPVEVLAGAWRQVQAELQQL----GGSAELRMAQRKAGPVVTDQGNLVLDVSFAGGINDPAGLETTINNIPGVLENGLFVGLADQVLV 221 The following BLAST results are available for this feature:
BLAST of DC887593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887593 ID=DC887593; Name=DC887593; organism=Citrus sinensis; type=EST; length=601bpback to top |