DC887588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 45 VPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 45 VPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 45 VPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 45 VPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_CAVPO (S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 45 VPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 45 VPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.652e-30 Identity = 68/123 (55.28%), Postives = 83/123 (67.48%), Query Frame = -2 Query: 226 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQW 594 IPLPNVT IL KV++YC+ H + P+ Q +D+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP EN+W Sbjct: 41 IPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRL--------DDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.652e-30 Identity = 68/123 (55.28%), Postives = 83/123 (67.48%), Query Frame = -2 Query: 226 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQW 594 IPLPNVT IL KV++YC+ H + P+ Q +D+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP EN+W Sbjct: 41 IPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRL--------DDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.036e-29 Identity = 68/130 (52.31%), Postives = 84/130 (64.62%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKV--DQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 NG+P+ NVTG IL+KV+EYCKKHV + + +++LK WD +F+K +TLFD++LAANYLNIK LLDL CQTVADMI GK P+EIR I+NDFTP ENQWAFE Sbjct: 39 NGVPIANVTGVILSKVIEYCKKHVVSDSPTEES--------------KDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.354e-29 Identity = 70/128 (54.69%), Postives = 80/128 (62.50%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 NGIPLP VTGKIL V+EYC KH V A +EDLK WD +F++ Q+T+FDLI+AANYLNIK LLDL CQTVADMIK T E RK FNI+ND+T ENQW FE Sbjct: 40 NGIPLPEVTGKILEMVIEYCNKH-HVDAANPCS--------------DEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152 The following BLAST results are available for this feature:
BLAST of DC887588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887588 ID=DC887588; Name=DC887588; organism=Citrus sinensis; type=EST; length=601bpback to top |