DC887585

Overview
NameDC887585
Unique NameDC887585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887585 vs. ExPASy Swiss-Prot
Match: BUD31_CAEEL (Protein BUD31 homolog OS=Caenorhabditis elegans GN=C07A9.2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.659e-52
Identity = 87/141 (61.70%), Postives = 110/141 (78.01%), Query Frame = -3
Query:  135 KVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 554
            K+R  R   P+GW+LI PTL + EAKMREAE +PH+GKRK E  WPIF+I HQRS+Y++++YYK+ EIS+ELYEFCL   + D+ LIAKWKK GYE LCC++C+  RD NFGT C+CRVPK  L  E+ +ECVHCGC GC+
Sbjct:    6 KLRRVRKSPPEGWDLIEPTLEQFEAKMREAETEPHEGKRKTEINWPIFRIHHQRSRYVYDMYYKKAEISRELYEFCLTAKFADAALIAKWKKQGYENLCCVKCVNTRDSNFGTACICRVPKSKLDAERVIECVHCGCHGCS 146          
BLAST of DC887585 vs. ExPASy Swiss-Prot
Match: CWF14_SCHPO (Cell cycle control protein cwf14 OS=Schizosaccharomyces pombe GN=cwf14 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.524e-45
Identity = 87/147 (59.18%), Postives = 108/147 (73.47%), Query Frame = -3
Query:  126 MPKVRTNRTKYP-DGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCASGD 560
            MP++RT+RTK P DG++ I PTL E + +MR+ EN    G  K E L PIF++ HQRS+YI++LYYKR  IS ELY + L Q Y D NLIAKWKKPGYE+LCCLRCIQ  +  FG+TC+CRVPK  L +++ V C HCGC GCAS D
Sbjct:    1 MPRLRTSRTKRPPDGFDEIEPTLIEFQDRMRQIENTMGKGT-KTEMLAPIFQLHHQRSRYIYDLYYKREAISTELYNWLLKQNYADGNLIAKWKKPGYEKLCCLRCIQTAESKFGSTCICRVPKSKLDKDQRVRCTHCGCNGCASCD 146          
BLAST of DC887585 vs. ExPASy Swiss-Prot
Match: BUD31_YEAST (Bud site selection protein 31 OS=Saccharomyces cerevisiae GN=BUD31 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 9.930e-40
Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = -3
Query:  126 MPKVRTNRTK-YPDGWELIAPTLREMEAKMREAENDPHD--GKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEK---------HVECVHCGCKGCASGD 560
            MP+++T R+K  PDG+E I PTL + E ++R+A+ D       +  E LW I ++ HQRS+YI+ LYYKR  ISK+LY++ + + Y D  LIAKW+K GYE+LCCLRCIQ  + N G+TC+CRVP+   EE+           +CVHCGC+GCAS D
Sbjct:    1 MPRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDKSSKLAAKSNEQLWEIMQLHHQRSRYIYTLYYKRKAISKDLYDWLIKEKYADKLLIAKWRKTGYEKLCCLRCIQKNETNNGSTCICRVPRAQLEEEARKKGTQVSFHQCVHCGCRGCASTD 157          
BLAST of DC887585 vs. ExPASy Swiss-Prot
Match: BUD31_MOUSE (Protein BUD31 homolog OS=Mus musculus GN=Bud31 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.421e-32
Identity = 68/143 (47.55%), Postives = 80/143 (55.94%), Query Frame = -3
Query:  135 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 560
            MPKV+ +R   PDGWELI PTL E++ KMRE                                         ELYE+C+ +GY D NLIAKWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L   + +EC HCGC+GC+
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMRE-----------------------------------------ELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCS 102          
The following BLAST results are available for this feature:
BLAST of DC887585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
BUD31_CAEEL8.659e-5261.70Protein BUD31 homolog OS=Caenorhabditis elegans GN... [more]
CWF14_SCHPO3.524e-4559.18Cell cycle control protein cwf14 OS=Schizosaccharo... [more]
BUD31_YEAST9.930e-4049.04Bud site selection protein 31 OS=Saccharomyces cer... [more]
BUD31_MOUSE3.421e-3247.55Protein BUD31 homolog OS=Mus musculus GN=Bud31 PE=... [more]

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Properties
Property NameValue
Genbank descriptionDC887585 EIC Citrus sinensis cDNA clone EIC0594 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887585 ID=DC887585; Name=DC887585; organism=Citrus sinensis; type=EST; length=577bp
GCAATTTAATGATGTTTGCAAGTTAGAAAGTCACGCATGCTCAACTGATT
GTCGATACTATCAGTCCTCCAAGAGTTAAGCTACATCGAATGCAAAAAAG
AAAGCTAGACAAAGTACTCAAATTAATCCCCACTTGCGCAGCCCTTACAG
CCACAATGCACACACTCAACATGTTTCTCTTCCCTCAGGTGCTTAGGAAC
TCTGCACACACATGTTGTGCCAAAGTTGTGATCCCTTGGCTGTATGCATC
GTAGGCAGCAGAGTCGTTCATATCCGGGCTTTTTCCACTTAGCGATTAAG
TTGCTGTCACCATATCCTTGATCCAAGCAGAACTCGTACAATTCCTTGGA
AATCTCATTCCTTTTGTAATAAAGCTCAAATATGTACTGGCTCCTCTGAT
GCGCAATTTTGAAGATGGGCCACAGTGTTTCACACTTTCTCTTGCCATCA
TGTGGATCATTTTCAGCTTCTCTCATCTTAGCCTCCATCTCACGAAGCGT
AGGCGCAATCAACTCCCACCCATCTGGATACTTGGTACGGTTTGTCCTCA
CTTTAGGCATTTTGCAACCTGTAGCTT
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