DC887573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_HUMAN (60S ribosomal protein L18 OS=Homo sapiens GN=RPL18 PE=1 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 1.368e-57 Identity = 113/172 (65.70%), Postives = 136/172 (79.07%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+PP+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR T AR+RI +AGG+ LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKG Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_DIACI (60S ribosomal protein L18 OS=Diaphorina citri GN=RpL18 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 2.333e-57 Identity = 108/172 (62.79%), Postives = 140/172 (81.40%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MG+D I ++ +RT PKS D+YL+LLVKLYRFL RRT+S F+K+ILKRLFMSK+N+PPM++S++ +FMK +E ++AV+VGT+ DD R++ +P L V ALR T+ AR+RI KAGGE +TFDQLALRAP G+NTVL++G + REA KHFGPAPGVPHSHTK +VRSKG Sbjct: 1 MGVD-ICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPMAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTVCALRVTDKARSRILKAGGEIITFDQLALRAPTGKNTVLMQGKRTGREANKHFGPAPGVPHSHTKAHVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_LYSTE (60S ribosomal protein L18 OS=Lysiphlebus testaceipes GN=RpL18 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.047e-57 Identity = 111/172 (64.53%), Postives = 139/172 (80.81%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +K +RT P+S DIYL+LLVK+YRFL RRT+S F ++ILKRLFMS++N PP+SL+R+ +FMK +++ IAVVVGT+TDD R++E+P LKV ALR TE AR RI KAGGE +TF++LA +P G TVL++G +NAREAVKHFGPAPGVPHSHTKP VRSKG Sbjct: 1 MGID-INHKYDRKVRRTEPRSQDIYLRLLVKVYRFLARRTNSKFSRIILKRLFMSRINLPPISLARVCRFMKKESRKNSIAVVVGTITDDARIFEIPKLKVCALRITEKARGRILKAGGEIITFEKLAEISPTGNKTVLMQGRRNAREAVKHFGPAPGVPHSHTKPLVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_BOVIN (60S ribosomal protein L18 OS=Bos taurus GN=RPL18 PE=2 SV=3) HSP 1 Score: 221.09 bits (562), Expect = 3.047e-57 Identity = 113/172 (65.70%), Postives = 135/172 (78.49%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+PP+SLSR+ + MK G+E K AVVVGT+TDD+RV EVP LKV ALR + AR+RI KAGG+ LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKG Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGREGKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_ORENI (60S ribosomal protein L18 OS=Oreochromis niloticus GN=rpl18 PE=2 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 5.197e-57 Identity = 109/172 (63.37%), Postives = 138/172 (80.23%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MG+D I K +K R PKS DIYL+LLVKLYRFL RR+++ F++V+L+RLFMS+ N+PP+++SRL + MK G+E+KIAVVVGTVTDD+R+ ++P LK+ ALR T+ AR RI KAGG+ +TFDQLAL +P GQ TVLL GP+ ARE +HFG APG PHSHTKPYVRSKG Sbjct: 1 MGVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPPIAVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_OREMO (60S ribosomal protein L18 OS=Oreochromis mossambicus GN=rpl18 PE=3 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 5.197e-57 Identity = 109/172 (63.37%), Postives = 138/172 (80.23%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MG+D I K +K R PKS DIYL+LLVKLYRFL RR+++ F++V+L+RLFMS+ N+PP+++SRL + MK G+E+KIAVVVGTVTDD+R+ ++P LK+ ALR T+ AR RI KAGG+ +TFDQLAL +P GQ TVLL GP+ ARE +HFG APG PHSHTKPYVRSKG Sbjct: 1 MGVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPPIAVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_SPOFR (60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 8.865e-57 Identity = 112/172 (65.12%), Postives = 137/172 (79.65%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +K +RT KS D+YL+LLVKLYR+L RRT+S F+ +IL+RLFMS++N+PP+SLSRL + MK +E IAVVVGT+T+D+R+Y+VP + V AL TE ARARI AGGE LTFDQLALRAP G TVLL+G +NAREAV+HFGPAPG P SHTKPYVR+KG Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRPPLSLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGEILTFDQLALRAPTGAKTVLLQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18B_XENLA (60S ribosomal protein L18-B OS=Xenopus laevis GN=rpl18-B PE=2 SV=4) HSP 1 Score: 218.779 bits (556), Expect = 1.512e-56 Identity = 109/172 (63.37%), Postives = 137/172 (79.65%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I K +K +R PKS DIYL+LLVKLYRFL RRT+S+F++V+LKRLFMS+ N+PP+S+SRL + MK G+E+K AVVVG +TDD+R++++P LKV AL+ T R+RI K+GG+ +TFDQLAL AP GQNTVLL GP+ ARE +HFG APG PHS TKPYV SKG Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPPLSMSRLIRKMKLQGRENKTAVVVGYITDDVRIHDIPKLKVCALKITSGDRSRILKSGGQIMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_PLUXY (60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 2.579e-56 Identity = 110/172 (63.95%), Postives = 138/172 (80.23%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +K +RT KS D+YL+LLVKLYR+L RRT++ F++++L+RLFMS++N+PP+SLSRL + MK +E IAVVVGT+T+D R+Y+VP + V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVRSKG Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPLSLSRLARHMKKPTREGLIAVVVGTITNDTRLYKVPKMTVAALHVTEKARARILDAGGEILTFDQLALRAPTGRKTVLIQGQRNAREAVRHFGPAPGAPRSHTKPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_BOMMO (60S ribosomal protein L18 OS=Bombyx mori GN=RpL18 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 5.746e-56 Identity = 109/172 (63.37%), Postives = 139/172 (80.81%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +K +RT KS DIYL+LLVKLYR+L RRT++ F++++L+RLFMS++N+PP+S+SRL + MK +E IAVVVGTVT+D+R+Y++P + V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDIYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKG 171 The following BLAST results are available for this feature:
BLAST of DC887573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887573 ID=DC887573; Name=DC887573; organism=Citrus sinensis; type=EST; length=569bpback to top |