DC887573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_DROME (60S ribosomal protein L18 OS=Drosophila melanogaster GN=RpL18 PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 3.724e-55 Identity = 110/172 (63.95%), Postives = 133/172 (77.33%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +K +RT PKS D+YL+LLVKLYRFL RRT+ F+++ILKRLFMSK+N+PP+SL R+ +F K + + VVVGTVTDD R+ VP L V AL T+TAR RI KAGGE LTFDQLALR+P G+NT+LL+G + AR A KHFG APGVPHSHT+PYVRSKG Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18A_XENLA (60S ribosomal protein L18-A OS=Xenopus laevis GN=rpl18-A PE=2 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 1.848e-54 Identity = 107/172 (62.21%), Postives = 134/172 (77.91%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I K +K +R PKS DIYL+LLVKLYRFL RRT+S+F++V+LKRLFMS+ N+PP+S+SRL + MK +E+K AVVVG +T D+R++++P L V AL+ T AR+RI KAGG+ +TFDQLAL AP GQNTVLL GP+ ARE +HFG AP PHS TKPYV SKG Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPPLSMSRLIRKMKLPRRENKTAVVVGCITADVRIHDIPKLTVCALKLTSGARSRILKAGGQIMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPSTPHSRTKPYVLSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_TAEAS (60S ribosomal protein L18 OS=Taenia asiatica GN=RPL18 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.414e-54 Identity = 109/171 (63.74%), Postives = 135/171 (78.95%), Query Frame = -2 Query: 5 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSK 511 MGID+ K K +R PKS D+YL+L+VKLY+FL RRT S F+ ++ +RLFMS++N+ P+SLSRLT+ MK G+E KIAVV+GTVT+DIR+ EVP L V ALR T AR RI KAGG+ +T DQLAL+APLG+ TVLL+GP+ AREA +HFGPAPGVP SHTKPYV SK Sbjct: 1 MGIDISHRNKRKVVRRN-PKSGDVYLRLMVKLYKFLARRTHSKFNNIVKRRLFMSRINRAPLSLSRLTRQMKKPGREGKIAVVIGTVTNDIRMREVPKLTVCALRVTAGARTRILKAGGKVMTVDQLALKAPLGKGTVLLQGPRKAREACRHFGPAPGVPGSHTKPYVISK 170
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_DROPS (60S ribosomal protein L18 OS=Drosophila pseudoobscura pseudoobscura GN=RpL18 PE=3 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 4.118e-54 Identity = 103/161 (63.98%), Postives = 128/161 (79.50%), Query Frame = -2 Query: 2 KKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKG--KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 478 +K +RT PKS D+YL+LLVKLYRFL RRT+ F+++ILKRLFMSK+N+PP+SL R+ +F K + + VVVGTVTDD R+ VP L + AL T+TAR RI KAGGE LTFDQLAL++P G+NT+LL+G + AR A KHFG APGVPHSHT+PYVRSKG Sbjct: 12 RKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQRIARFFKAANQPESTVVVVGTVTDDARLLVVPKLTLCALHVTQTARERILKAGGEVLTFDQLALKSPTGKNTLLLQGKRTARTACKHFGKAPGVPHSHTRPYVRSKG 172
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_ANOGA (60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 2.498e-51 Identity = 104/173 (60.12%), Postives = 133/173 (76.88%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDK-IAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +K +RT PKS D+YL LLVKLYRFL RRT F+K++++RLFMS+ N PPMSL+R+ MK GK++K +AVV+GTVT+D+R+ +VP L V ALR T+ AR RI K GG+ TFDQLAL +P G+NTVL++G + ARE KHFG APGVPHS+T+PYV+SKG Sbjct: 1 MGID-INHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHPPMSLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGGKIYTFDQLALLSPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSKG 172
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_CAEBR (60S ribosomal protein L18 OS=Caenorhabditis briggsae GN=rpl-18 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 7.269e-51 Identity = 102/172 (59.30%), Postives = 130/172 (75.58%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I+ + ++RTAPKS + YL+LL KLY FL RRT F+ ++LKRL MS+ N+ P+SL+++ + +K G E K V + TVTDD R+YEVP + + AL TE ARARI AGGE +T DQLALR+P G+NTV L+GP++AREA KHFGPAPGVPHSHTKP+VRSKG Sbjct: 1 MGID-ISHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQPLSLAKVARVVKQAGNEKKTVVTLSTVTDDARLYEVPKISLAALHVTEGARARILAAGGEIITLDQLALRSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPHVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_CAEEL (60S ribosomal protein L18 OS=Caenorhabditis elegans GN=rpl-18 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.115e-50 Identity = 102/172 (59.30%), Postives = 129/172 (75.00%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I + ++RTAPKS + YL+LL KLY FL RRT F+ ++LKRL MS+ N+ P+SL++L + ++ G E+K V + TVTDD R+Y VP + V AL TE ARARI AGGE +T DQLAL++P G+NTV L+GP++AREA KHFGPAPGVPHSHTKPYVRSKG Sbjct: 1 MGID-INHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQPLSLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGEIITLDQLALKSPKGENTVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_AEDAE (60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.115e-50 Identity = 109/173 (63.01%), Postives = 131/173 (75.72%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GK-EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +K +RT PKS D+YL+LLVKLYRFL RRT F+K+IL+RLFMS+ N+PP+SLSR+ K MK GK E+ IAVVVGTVT+D R P + V ALR TE AR RI K GG+ TFDQLAL AP G+NTVL++G + AREA HFG APGVPHS+T+PYV+SKG Sbjct: 1 MGID-INHKWDRKVRRTKPKSLDVYLRLLVKLYRFLYRRTHKKFNKIILRRLFMSRTNQPPISLSRVAKLMKLRGKDENTIAVVVGTVTNDDRKLYCPKMNVCALRVTEKARERILKWGGKIYTFDQLALVAPTGKNTVLMQGERTAREAFTHFGRAPGVPHSNTRPYVQSKG 172
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_YEAST (60S ribosomal protein L18 OS=Saccharomyces cerevisiae GN=RPL18A PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.607e-50 Identity = 100/172 (58.14%), Postives = 128/172 (74.42%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID + + RTAPKS+++YLKLLVKLY FL RRTD+ F+KV+LK LF+SK+N+PP+S+SR+ + +K G +K VVVGTVTDD R++E P V ALRFT ARA+I KAGGEC+T DQLA+RAP GQNT++LRGP+N+REAV+HFG PH P + S G Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTG 169
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18B_SCHPO (60S ribosomal protein L18-B OS=Schizosaccharomyces pombe GN=rpl18b PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 4.711e-50 Identity = 108/174 (62.07%), Postives = 126/174 (72.41%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGK----EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +KS+R+ P S ++YLKLLVKLYRFL RRTDS F+K ILKRLF SK N+PP+S+S++ K E K V+VGTVTDD R+ VP L V ALRFT++ARARI KAGGE LT DQLALRAP G NTVLLRG K+AREA +HFG PH H PYVRS+G Sbjct: 1 MGID-IERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG---PHKHKAPYVRSEG 170 The following BLAST results are available for this feature:
BLAST of DC887573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887573 ID=DC887573; Name=DC887573; organism=Citrus sinensis; type=EST; length=569bpback to top |