DC887561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_ENT38 (Triosephosphate isomerase OS=Enterobacter sp. (strain 638) GN=tpiA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 7.885e-22 Identity = 58/101 (57.43%), Postives = 72/101 (71.29%), Query Frame = -1 Query: 212 SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 502 S ++ VV+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A+VA I YGGSVN AN EL QPD+DG LVGGASLK + F I+K+A K Sbjct: 157 SAFEGVVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKVAEQVIIQYGGSVNAANAAELFTQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_PROA2 (Triosephosphate isomerase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tpiA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.030e-21 Identity = 54/103 (52.43%), Postives = 70/103 (67.96%), Query Frame = -1 Query: 224 QTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 529 Q K E +++ ++V+AYEPVWAIGTGK A+ QAQEVHA +R + S AA RI YGGSV +N +EL A PD+DG L+GGASL E F+ I+K+A Sbjct: 147 QVKEGLEGVADIGDIVIAYEPVWAIGTGKTASSLQAQEVHASIRATVAGLYSEPAAAGVRIQYGGSVKPSNAEELFAMPDIDGGLIGGASLNAEDFVAIVKAA 249
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.030e-21 Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = -1 Query: 254 NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 499 ++ +VLAYEPVWAIGTGK A+PAQAQE+HA +R + + E+A +T I+YGGS +N KEL A PDVDG L+GGA+LK Sbjct: 158 DFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_BACFN (Triosephosphate isomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tpiA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.030e-21 Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = -1 Query: 254 NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 499 ++ +VLAYEPVWAIGTGK A+PAQAQE+HA +R + + E+A +T I+YGGS +N KEL A PDVDG L+GGA+LK Sbjct: 158 DFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_ERWT9 (Triosephosphate isomerase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=tpiA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.345e-21 Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = -1 Query: 212 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 487 VV+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A VAA I YGGSVN N EL AQPD+DG LVGGASLK + F I+K+A K Sbjct: 162 VVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKKDATVAAQVIIQYGGSVNDKNAAELFAQPDIDGALVGGASLKADAFAAIVKAAAAAK 253
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_AZOPC (Triosephosphate isomerase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=tpiA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.345e-21 Identity = 50/88 (56.82%), Postives = 63/88 (71.59%), Query Frame = -1 Query: 227 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKS 487 ++LAYEPVWAIGTG+ ATP Q QE+H +R+ L DN +A T I+YGGS N N KEL PDVDG L+GGASLK + F+ II++ Sbjct: 163 IILAYEPVWAIGTGRTATPVQVQEMHIFIRQILIDNYGQAIANETSILYGGSCNAGNAKELFINPDVDGGLIGGASLKVDTFLSIIEA 250
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_NOCFA (Triosephosphate isomerase OS=Nocardia farcinica GN=tpiA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.757e-21 Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = -1 Query: 254 AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 514 AE+I+ VV+AYEPVWAIGTGKVA+ A AQEV +R L + EVAA R++YGGSVN N EL AQPDVDG LVGGASLK Sbjct: 161 AEQIAK---VVIAYEPVWAIGTGKVASAADAQEVCGAIRAELAELAGPEVAAQVRVLYGGSVNAKNVGELVAQPDVDGALVGGASLK 244
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_SHELP (Triosephosphate isomerase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=tpiA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.294e-21 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 224 WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 496 +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + A Sbjct: 167 FDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPYIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSTEFLSLCSIA 257
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_JANMA (Triosephosphate isomerase OS=Janthinobacterium sp. (strain Marseille) GN=tpiA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.294e-21 Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = -1 Query: 224 SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 502 S+ +V+AYEPVWAIGTGK ATPA AQEVHA LRK L+ +AE A RI+YGGS+ N KEL A D+DG L+GGA+LK +F+ I+ +A Sbjct: 156 SDLAKIVVAYEPVWAIGTGKTATPAMAQEVHAMLRKQLQAK-NAEAAMQVRILYGGSMKPENAKELLAMSDIDGGLIGGAALKAADFLAIVHAA 248
BLAST of DC887561 vs. ExPASy Swiss-Prot
Match: TPIS_BACV8 (Triosephosphate isomerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=tpiA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.294e-21 Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = -1 Query: 254 NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 499 ++ ++LAYEPVWAIGTGK AT QAQE+HA +R + D EVA +T I+YGGS +N KEL A PDVDG L+GGA+LK Sbjct: 158 DFSKIILAYEPVWAIGTGKTATAEQAQEIHAFIRSLIADKYGKEVADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239 The following BLAST results are available for this feature:
BLAST of DC887561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887561 ID=DC887561; Name=DC887561; organism=Citrus sinensis; type=EST; length=529bpback to top |