DC887517
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 2.598e-12 Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAG 474 +VTKRV + + EW WNWR++GD+M+NGA+F SG YA+ASS+ K A+++ LT ++G Sbjct: 367 EVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSGAAAPASYARASSLGAKPASVVSMLTYSSG 430
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.290e-11 Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAG 474 +VTKR++T +EW WNWR+E D++VNGAFF PSG G S ++ S+ K A+++D +T +AG Sbjct: 379 EVTKRLDTKGNEWMEWNWRSEKDLLVNGAFFTPSGEGASGD-SQTLSLPAKPASMVDAITASAG 441
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.200e-11 Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAG 474 +VTK ESEW WNWR+EGD+M+NGA+F SG ++ +A+ASS+ + + L+ +T +AG Sbjct: 328 EVTKHENAPESEWKNWNWRSEGDLMLNGAYFRESGGRAASSFARASSLSGRPSTLVASMTRSAG 391
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.200e-11 Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAG 474 +VTK + ES+W WNWR+EGD+++NGA+F SG + YA+ASS+ + ++L+ +T AG Sbjct: 336 EVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAG 399
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.400e-11 Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = -2 Query: 265 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVG--LSTQYAKASSVEPKSAALIDRLTMNAGVFGGPR 474 +VTK + E EW WNWR+EGD+++NGAFF SG G S+ Y+KASS+ + ++ + +T+ +G R Sbjct: 357 EVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKR 428 The following BLAST results are available for this feature:
BLAST of DC887517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887517 ID=DC887517; Name=DC887517; organism=Citrus sinensis; type=EST; length=478bpback to top |