DC887405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALP-KGQTINIGTKDDVSAVKKTGCCS 684 VIM+ GNK+DL+HLRAVS ED Q+ AEKE F+ETSALE++N+E AF +LT+IY ++S+KAL + + LP +G TIN+ D SA ++ CCS Sbjct: 119 VIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGTTINVA---DASANQRRSCCS 213
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQ-TINIGTKDDVSAVKKTGCCS 684 VIMLVGNK+DL+HLR V TE AQ+F E+E F+ETSALES NVE AF ++LT+IY +VS+K LD D+ + +G+ I I D KK GCCS Sbjct: 119 VIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20 Identity = 54/102 (52.94%), Postives = 69/102 (67.65%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDD-----PAALPKGQTINIGTKDDVSAVKKTGCCS 684 VIML+GNK+DL LR V TEDA+ FAE+EN FFMETSALES NVENAF VLT+IYR+VS+K L ++ ++L KG I + ++ K + C S Sbjct: 125 VIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19 Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = -2 Query: 391 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPA---ALP-KGQTINIGTKDDVSAVKKTGCCSA 684 VIM+ GNK+DL HLR+V+ ED QS AEKE F+ETSALE+ NVE AF +L +IY ++S+KAL + A A+P +G TIN+ DD S K CCS+ Sbjct: 119 VIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTINV---DDTSGGAKRACCSS 217
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.776e-19 Identity = 54/100 (54.00%), Postives = 70/100 (70.00%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPA--ALP-KGQTINIGTKDDVSAVKKTGCCS 684 VI+L GNK+DL+HLRAVS +D Q+ +KE F+ETSALE+LNV+ AF +LT IY ++S+KAL + A ALP +G TIN+ D SA K GCCS Sbjct: 119 VIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAAASTALPGQGTTINV---SDNSANVKRGCCS 215
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.625e-19 Identity = 52/102 (50.98%), Postives = 73/102 (71.57%), Query Frame = -2 Query: 391 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAA---LP-KGQTINIGTKDDVSAVKKTGCCSA 684 VIM+VGNK+DL HLRAVS ++ ++ AEKE FF+ETSA+E++NVE AF ++T++Y +V+RKAL + AA LP +G+TI+I D + K CCSA Sbjct: 119 VIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAASAPLPSQGKTISI---DSAAGNTKRACCSA 217
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.378e-18 Identity = 50/100 (50.00%), Postives = 65/100 (65.00%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALP---KGQTINIGTKDDVSAVKKTGCCS 684 VIM+ GNK+DL HLRAVS +D + +EKE F+ETSALE+ N+E AF +LT+IY +VS+KAL + A +G TIN+ D S K GCCS Sbjct: 119 VIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVA---DTSGNTKKGCCS 215
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = -2 Query: 397 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVK--KTGCC 684 VIMLVGNK+DLRHLRAV T++A++FAEK N F+ETSAL+S NVE AF +LT+IYR+VS+K + P ++I K K CC Sbjct: 118 VIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRSAHDESPGNNVVDISVPPTTDGQKSNKLQCC 215
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = -2 Query: 397 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVK--KTGCC 684 VIMLVGNK+DLRHLRAV T++A++FAEK N F+ETSAL+S NVE AF +LT+IYR+VS+K + P ++I K K CC Sbjct: 118 VIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = -2 Query: 397 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVK--KTGCC 684 VIMLVGNK+DLRHLRAV T++A++FAEK N F+ETSAL+S NVE AF +LT+IYR+VS+K + P ++I K K CC Sbjct: 118 VIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215 The following BLAST results are available for this feature:
BLAST of DC887405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887405 ID=DC887405; Name=DC887405; organism=Citrus sinensis; type=EST; length=685bpback to top |