DC887405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18 Identity = 48/95 (50.53%), Postives = 63/95 (66.32%), Query Frame = -2 Query: 397 IMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCC 681 IMLVGNK+DLRHLR VST++A+ F+EK F+ETSAL+S NVE AF +LTQIY ++SR + G +TI + T + A K+GCC Sbjct: 121 IMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTGPQTTIDSNTETIILPTTSEPPAA-KSGCC 214
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18 Identity = 47/96 (48.96%), Postives = 61/96 (63.54%), Query Frame = -2 Query: 397 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCC 684 VIMLVGNK+DLRHLRAV T++A++FAEK F+ETSAL+S NVE AF +LT+IYR+VS+K + + P + I K CC Sbjct: 118 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKMQCC 213
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = -2 Query: 397 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCC 684 VIMLVGNK+DLRHLRAV T++A++FAEK F+ETSAL+ NVE AF +LT+IYR+VS+K + + P + I K CC Sbjct: 118 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCC 213
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16 Identity = 50/103 (48.54%), Postives = 68/103 (66.02%), Query Frame = -2 Query: 391 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGD-----DPAALPKGQTINIGTKDDVSAVKKTGCCSA 684 VIML+GNK DL RAV TEDA+ FA+KE FF+ETSA+E+ N+E+AF VLT+I+ +V++K L D +PA+L G+ I + V KK CCS+ Sbjct: 122 VIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASL-TGKKILVPGPGQVIPEKK-ACCSS 222
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = -2 Query: 391 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGD-----DPAALPKGQTINIGTKDDVSAVKKTGCCSA 684 VIML GNK DL RAV TEDA+ FA+KE FF+ETSA+E+ +E+AF VLT+I+ +V++K L + +PA+L G+ I + V KK CCS+ Sbjct: 122 VIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASL-TGKKILVPGPGQVIPGKK-ACCSS 222
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14 Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = -2 Query: 397 LVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGD-------DPAALPKGQTINI-GTKDDVSAVKKTGCC 675 L+GNK+DL HLRAV TE++++FA++ F ETSAL S NV+ AF E++ IY+ VS+ +D+GD + A+ P G TI++ T ++ CC Sbjct: 123 LIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = -2 Query: 391 MLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKAL--DVGDDPAALPKGQTINIGTKDDVSAVKKT---GCCSA 678 MLVGNK DL ++RAVS E+ ++ AE+E FF+ETSAL+S NV+ AF V+ IY VSRK L D D + + + KDD SA K++ CCS+ Sbjct: 121 MLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRVSLV----KDDNSASKQSSGFSCCSS 217
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13 Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = -2 Query: 394 MLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCCS 678 ML+GNK DL +RAVS E+ +S AE E FFMETSAL+S NV+ AF V+ +IY +SRK L+ L + + K++ K CCS Sbjct: 121 MLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEELTVNRVSLV--KNENEGTKTFSCCS 213
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12 Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = -2 Query: 397 LVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPA------ALPKGQTINI--GTKDDVSAVKKTGCC 675 L+GNK+DL HLRAV T++A++FA + F ETSAL S NV+ AF E++ I+++VS+ +D+ PKG TI++ K+D K + CC Sbjct: 123 LIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGTNNMGSNGAPKGPTISLTPAPKED-KKKKSSNCC 222
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11 Identity = 38/103 (36.89%), Postives = 55/103 (53.40%), Query Frame = -2 Query: 397 IMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKG--------QTINIGTKDDVSAVKKTGCC 681 IML+GNK DL H RAV+TE+ + FA++ F+ETSA + NVE AF +IY+ + DV ++ + G QT+ G + A K + CC Sbjct: 114 IMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGGGNAGPQTVKPG---EGGAAKSSSCC 213 The following BLAST results are available for this feature:
BLAST of DC887405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887405 ID=DC887405; Name=DC887405; organism=Citrus sinensis; type=EST; length=685bpback to top |