DC887352
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX1A_MOUSE (Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 37/111 (33.33%), Postives = 64/111 (57.66%), Query Frame = -2 Query: 343 VTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRK 675 +TG+ E ++ ++E+G+ I + + L+EI+ RH + LE + EL +F+DMA+LV++QG+M+D IE V AVD+V+ + +KA K Q +R+ Sbjct: 155 ITGRTTTSEELEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKARR 263
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX12_PONAB (Syntaxin-12 OS=Pongo abelii GN=STX12 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = -2 Query: 334 DQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 642 +QL+ E+ Q Q+ L I+ER A+R LE +L++ QIF D+A+++ QGD++D+IE+ V S+ HV+ LQ+A QK SRK MC Sbjct: 150 EQLVSFDSHEEWNQMQSQDDEVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQLQRAAYYQKKSRKKMC 252
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX2_RAT (Syntaxin-2 OS=Rattus norvegicus GN=Stx2 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = -2 Query: 337 VTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIM-DTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSR--KWM 675 +TG+ +E +++++E+G I + QI L EI+ RH + LE + EL ++F+DMA+ V+ QG+M++NIE V ++VD+V+ +KA K Q +R KW+ Sbjct: 156 ITGRTTTDEELEEMLESGKPSIFISDIISDS---QITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVEHAKEETKKAIKYQSKARRKKWI 268
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX7_BOVIN (Syntaxin-7 OS=Bos taurus GN=STX7 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 37/114 (32.46%), Postives = 69/114 (60.53%), Query Frame = -2 Query: 334 VTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 675 V+G +E + ++ + + +S+ Q +Q++ + D L IQER ++R LE ++++ +IF D+ +++ QGD++D+IE+ V +A HVQ N L +A Q+ SRK +C Sbjct: 128 VSGGFPEESSKERNLVSWESQTQPQAQLQDEEITE--DDLRLIQERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRAADYQRKSRKTLC 239
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX1A_CAEEL (Syntaxin-1A homolog OS=Caenorhabditis elegans GN=unc-64 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = -2 Query: 343 VTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRK 675 + GK+ +E ++++IE+G+ Q I + Q TLA+I+ RH+ + LE + EL +F+DMA+LV++QG+M+D IE V A + V +KA + Q +R+ Sbjct: 156 IAGKQVGDEDLEEMIESGNPGVFTQGIITDTQ--QAKQTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVADTKKAVQYQSKARR 264
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX1A_CAEBR (Syntaxin-1A OS=Caenorhabditis briggsae GN=unc-64 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = -2 Query: 343 VTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRK 675 + GK+ +E ++++IE+G+ Q I + Q TLA+I+ RH+ + LE + EL +F+DMA+LV++QG+M+D IE V A + V +KA + Q +R+ Sbjct: 158 IAGKQVGDEDLEEMIESGNPGVFTQGIITDTQ--QAKQTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFVDRAVADTKKAVQYQSKARR 266
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX1A_BOVIN (Syntaxin-1A OS=Bos taurus GN=STX1A PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 36/111 (32.43%), Postives = 64/111 (57.66%), Query Frame = -2 Query: 343 VTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRK 675 +TG+ E ++ ++E+G+ I + + L+EI+ RH + LE + EL +F+DMA+LV++QG+M+D IE V +VD+V+ + +KA K Q +R+ Sbjct: 155 ITGRTTTSEELEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARR 263
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX7_RAT (Syntaxin-7 OS=Rattus norvegicus GN=Stx7 PE=1 SV=4) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 34/90 (37.78%), Postives = 53/90 (58.89%), Query Frame = -2 Query: 334 QKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 603 Q +Q Q D L I ER ++R LE ++++ +IF D+ +++ QGD++D+IE+ V SA HVQ N L +A Q+ SRK +C Sbjct: 150 QPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESAEVHVQQANQQLSRAANYQRKSRKTLC 239
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX2_MOUSE (Syntaxin-2 OS=Mus musculus GN=Stx2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 38/116 (32.76%), Postives = 67/116 (57.76%), Query Frame = -2 Query: 337 VTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIM-DTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSR--KWM 675 +TG+ ++ +++++E+G I + QI L EI+ RH + LE + EL ++F+DMA+ V+ QG+M++NIE V ++VD+V+ +KA K Q +R KW+ Sbjct: 155 ITGRTTTDDELEEMLESGKPSIFISDIISDS---QITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVEHAKEETKKAIKYQSKARRKKWI 267
BLAST of DC887352 vs. ExPASy Swiss-Prot
Match: STX7_PONAB (Syntaxin-7 OS=Pongo abelii GN=STX7 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 36/114 (31.58%), Postives = 66/114 (57.89%), Query Frame = -2 Query: 334 VTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 675 V+G ++ + ++ + + +S+ Q +Q Q D L I ER ++R LE ++++ +IF D+ +++ QGD++D+IE+ V +A HVQ N L +A Q+ SRK +C Sbjct: 128 VSGSFPEDSSKERNLVSWESQT--QPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRAADYQRKSRKTLC 239 The following BLAST results are available for this feature:
BLAST of DC887352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887352 ID=DC887352; Name=DC887352; organism=Citrus sinensis; type=EST; length=706bpback to top |