DC887343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 8.928e-57 Identity = 106/187 (56.68%), Postives = 147/187 (78.61%), Query Frame = -2 Query: 196 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 756 F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I IH+ RM L ++L ++ + SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ ++ E Sbjct: 246 FLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 431
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.166e-56 Identity = 111/186 (59.68%), Postives = 141/186 (75.81%), Query Frame = -2 Query: 199 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 756 FIRV GSE VQKYIGEG+R+VRE+F +A+E APSIIF+DE+D+I + R S + +GD EVQRTM++LL +LDGF+ +KV+ ATNRIDILD A+LRPGR DR IE P P E R+ I KIH+R+M L +D K++A GASGA++KA+CTEAGMFA+RE R VT DF A+ KV+KK T Sbjct: 203 FIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDT-SGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKKTT 387
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.166e-56 Identity = 108/187 (57.75%), Postives = 146/187 (78.07%), Query Frame = -2 Query: 196 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 756 F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L + + SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E Sbjct: 247 FLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.166e-56 Identity = 108/187 (57.75%), Postives = 146/187 (78.07%), Query Frame = -2 Query: 196 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 756 F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L + + SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E Sbjct: 247 FLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.166e-56 Identity = 108/187 (57.75%), Postives = 146/187 (78.07%), Query Frame = -2 Query: 196 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 756 F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L + + SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E Sbjct: 247 FLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.523e-56 Identity = 112/196 (57.14%), Postives = 150/196 (76.53%), Query Frame = -2 Query: 169 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLW 756 FIR++ ELVQK+IGEG+R+VRELF +ARE APSIIF+DEID+IG+ RM + +GD EVQRT+ +LL ++DGF+ + IKV+ ATNR DILD ALLRPGR DR I+ P P+EE R +I KIH+R MNL +DL+K+A+ GASGA++KA+CTEAGM A+RE R VT +DF AV +VM K+ E++ ++ + Sbjct: 241 FIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDAT-SGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKEEESGEFKRAY 435
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.523e-56 Identity = 107/187 (57.22%), Postives = 146/187 (78.07%), Query Frame = -2 Query: 196 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 756 F+RV GSEL+QKY+G+G ++VRELF +A EH PSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L ++ + SGA++KA+CTEAG+ ALRERR+ VT EDF+ + + K+TE Sbjct: 247 FLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENFLYKKTE 432
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.598e-56 Identity = 106/187 (56.68%), Postives = 149/187 (79.68%), Query Frame = -2 Query: 196 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 756 F+R+ GSEL+QKY+G+G +MVRELF +A E+APSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF++ +KVLMATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + ++L++ + SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ ++ E Sbjct: 250 FLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKKE 435
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.431e-56 Identity = 113/185 (61.08%), Postives = 146/185 (78.92%), Query Frame = -2 Query: 202 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 756 FIRV GSELV+K+IGEG+R+V ELF MA+E AP+IIF+DEID+IG+ RM+ +G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+ RL+ILK+H+R+MNL R +DL IA+ GASGA+LKA+ TEAGMFA+R+RR +VTQEDF AV KV+ E Sbjct: 200 FIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLGAE 382
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 7.558e-56 Identity = 113/183 (61.75%), Postives = 140/183 (76.50%), Query Frame = -2 Query: 208 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 756 FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLRPGR+DRK+EF P+ ESR I KIH+R MN R I + +A ++GA++++VCTEAGM+A+R RR VT++DF AV KV+K Sbjct: 229 FIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 410 The following BLAST results are available for this feature:
BLAST of DC887343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887343 ID=DC887343; Name=DC887343; organism=Citrus sinensis; type=EST; length=757bpback to top |