DC887343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: FIGN_DANRE (Fidgetin OS=Danio rerio GN=fign PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14 Identity = 58/220 (26.36%), Postives = 114/220 (51.82%), Query Frame = -2 Query: 148 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL-KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEA--------------GMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK*SFPCA 756 F+ +SGS LV K++GEG ++V+ F++AR PS++F+ ++D + S+++ +S V R ELL QLDG +S + V+ +T++ + +D++L R +++ P P+ +R I+ ++ S+ + ++ + ++ +G SG ++ +C EA GM + R V+ +DFE K+ ++K + W F C+ Sbjct: 525 FLLLSGSALVTKWLGEGEKIVQASFLIARCRQPSVVFISDVDLLLSSQLSE-----ESPVNRIKSELLLQLDGVLSSPEEHVLVVCSTSKPEEIDESLRR--YFVKRLLVPLPDATARHQIISQLLSQHNYCLSDKEVTLLVQRTDGFSGLDVVRLCQEALVGPLHGMPGADLSGMIPGQMR--PVSYQDFENVFCKIQPSISQKELDTYTEWNKMFGCS 735
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: YR476_MIMIV (Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R476 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.157e-14 Identity = 53/184 (28.80%), Postives = 101/184 (54.89%), Query Frame = -2 Query: 238 FIRVSGSELVQKYIGEGSRMVRELFVMARE----HAP-SIIFMDEIDSIGSARMESGSGNGDSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM----NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL-RERRIHVTQED 756 F +SG E+ K++G +R +F A++ H S ++M ID I A + S SG+ + V+ +++ + L ++DG E N + + TNR+++LD A +R GR I+ P++E R+ I +IH++++ L +D+ K+A SGA+++ + A +++L R ++ V +D Sbjct: 634 FRLMSGPEIFNKWVGGSESNIRAIFKPAKDAWKKHGDKSPVYMVVIDEI-DAMLPSRSGSDGNPVRDSVVNQFLAEMDGLEVFNNLICIGITNRLELLDPATIRSGRFGIHIKIDLPDQEGRVKIFQIHTKKLQELNRLSDDVDISKLAVITEEFSGADIEGMVELASVYSLERLNKLDVINDD 816
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 59/176 (33.52%), Postives = 89/176 (50.57%), Query Frame = -2 Query: 268 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS---------NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRL----DILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 756 F +S S L K++GE ++VR LF +A++ +PSIIF+DEIDS+ SAR S GN +R E L Q + ++ VL ATN +D A R R R+ P P+E +R ++LK ++L D++ I + SG++L A+ +A M LR Sbjct: 520 FFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLE---DIEAIVKATEYYSGSDLTALAKDAAMGPLR 688
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 56/173 (32.37%), Postives = 90/173 (52.02%), Query Frame = -2 Query: 268 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE---------ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILK-IHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 756 F +S S L KY+G+ ++VR LF +A+ S+IF+DEIDSI SAR +SG+ + S +R E L Q S ++ VL ATN +D+A R R ++ P P +E+R L + +++ + DL+++ G SG+++ A+ +A M LR Sbjct: 440 FFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARNDSGNEHESS--RRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGPLR 608
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: FTSH_CHLVU (Cell division protease ftsH homolog OS=Chlorella vulgaris GN=ftsH PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 42/138 (30.43%), Postives = 78/138 (56.52%), Query Frame = -2 Query: 175 SEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRK 585 +E Q ++L +LL +LDG + N + + ATNR ++LD ALLRPGR D+ ++ P ++ R++IL+ + + + + + E+ G + A+L + E+ + A+ + H T E E + ++ E+EK L+K Sbjct: 1148 NEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQTLGYQKTMPWAYFGERTVGFTAADLATLMNESALKAILNQSNH-TIETLEHGIERLTTSESEKYTVLKK 1284
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: FTSH_OLTVI (Cell division protease ftsH homolog OS=Oltmannsiellopsis viridis GN=ftsH PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12 Identity = 44/153 (28.76%), Postives = 84/153 (54.90%), Query Frame = -2 Query: 199 DEIDSIGSARME-SGSGNGDSEVQRTMLE----LLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 642 DE+++ S + S + + EV++ L LL ++DG N + V ATNR ++LD AL+RPGR D+ + P ++ R++ILK++++++ + I + A + G S A+L A+ ++ + A+ + H T + E + + K +T Sbjct: 1474 DEMETRSSESTKASHESSNEMEVEKNQLSALIRLLVEMDGLNPLNGVIVFGATNRPEVLDPALIRPGRFDQILPIELPGKQKRVEILKLYAKKLGTAKSISWEYFANRTVGLSAADLAAIMNQSTILAVFNDQRH-TLKTLEYGLNIIYKPKT 1625
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: Y4KL_RHISN (Uncharacterized AAA family ATPase y4kL OS=Rhizobium sp. (strain NGR234) GN=NGR_a02840 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.492e-11 Identity = 54/176 (30.68%), Postives = 86/176 (48.86%), Query Frame = -2 Query: 223 RVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV 750 RV L+ Y+GE + +R+ F AR+ P ++F DE D++ R +SG N E++R + LL +D + + + ATN LD A+ R R D + F P LK+ + N+ D + + + G S AE++ VCT+A + ERR V + DF A+ Sbjct: 148 RVKLDRLISSYLGETATNIRKTFEFARKQ-PCVLFFDEFDALARTRDDSGEHN---ELRRVVNSLLLFIDNMQPKGFL--IAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFK--NVPVAFDPARNSAALEGYSFAEIERVCTQAIKAMIIERRKQVQERDFNRAL 313
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: YCF46_ODOSI (Uncharacterized AAA domain-containing protein ycf46 OS=Odontella sinensis GN=ycf46 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.949e-11 Identity = 49/184 (26.63%), Postives = 87/184 (47.28%), Query Frame = -2 Query: 172 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSR--RMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 717 +GE +R++ +A +P I+++DE+D S G + V T + L+ E + + V+ N +D+L ++R GR D P E R +I KIH + R N + D KK+A+ SGAE++ EA M+ +++ T +D +A+ +++ +N KL Sbjct: 300 VGESESRLRQMIDVAETLSPCILWIDEMDKAFSNNDSRGDSGTSNRVLATFISWLS-----EKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGAEIRQSIIEA-MYQAFDQQREFTTDDICLALKQLIPLAQLENSQTLKL 477 The following BLAST results are available for this feature:
BLAST of DC887343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887343 ID=DC887343; Name=DC887343; organism=Citrus sinensis; type=EST; length=757bpback to top |