DC887343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.475e-51 Identity = 100/185 (54.05%), Postives = 139/185 (75.14%), Query Frame = -2 Query: 202 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 756 F++++G +LVQ +IG+G+++VR+ F +A+E AP IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + +IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSR+MN+ ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K+ Sbjct: 233 FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 416
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 202.601 bits (514), Expect = 1.927e-51 Identity = 99/185 (53.51%), Postives = 141/185 (76.22%), Query Frame = -2 Query: 202 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 756 F++++G +LVQ +IG+G+++VR+ F++A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSR+MN+ ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K+ Sbjct: 232 FLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 415
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.927e-51 Identity = 101/191 (52.88%), Postives = 139/191 (72.77%), Query Frame = -2 Query: 184 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMS 756 F++V S ++ KYIGE +R++RE+F AREH P IIFMDEID+IG R G+ + D E+QRT++ELLNQLDGF+ K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR++ILKIH+ + ID + I + G +GA+L+ +CTEAGMFA+R R +V EDF AV K+ + + ++ S Sbjct: 201 FLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSS 390
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.927e-51 Identity = 105/181 (58.01%), Postives = 134/181 (74.03%), Query Frame = -2 Query: 214 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 756 F+RV G+EL+Q+Y+GEG ++VRELF +A HAPSIIF+DEID+IG R + SG G EVQRTMLELLNQLDGF+ N IKV+MATN+I+ LD AL+RPGRIDRKIEF P+ ++ I IH+ RM L ++++ + SGA++KA+CTEAGM ALRERR VT +DF A KV Sbjct: 231 FLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSG-GRREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFISAREKV 410
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.516e-51 Identity = 99/180 (55.00%), Postives = 139/180 (77.22%), Query Frame = -2 Query: 217 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 756 F+RV GSELVQKYIGEG+R+VRELF +A++ +PSIIF+DEID+IG++R ES + +GD EV RT+++LL ++DGF ++++ ATNRIDILD+ALLRPGR DR IE P P+ E R+ IL IH MN+ + +D++ IA + +G +GA+L+++C EAGMFA+R VT EDFE ++ K Sbjct: 215 FLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNT-SGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEK 393
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.286e-51 Identity = 97/188 (51.60%), Postives = 140/188 (74.47%), Query Frame = -2 Query: 193 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 756 F++++G +LVQ YIG+G+R+VR+ F +A+E P+IIF+DEID+IG+ R +S GD EVQRTMLELLNQLDGF +S ++K++ ATNR+DILD ALLR GR+DRKIEFP PN R IL+IH+R+M++ ++ ++A G +GA+ KAVC EAGM ALR+ + ++Q DF + +V+ ++ K Sbjct: 210 FLKLAGPQLVQMYIGDGARLVRDAFALAKERKPTIIFIDEIDAIGAKRSDSDQ-TGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDFMDGIQEVLSRKKSK 396
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.605e-51 Identity = 98/185 (52.97%), Postives = 140/185 (75.68%), Query Frame = -2 Query: 202 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 756 F++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR +T ED + +V K+ Sbjct: 251 FLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDHMEGILEVQAKK 434
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.321e-51 Identity = 97/185 (52.43%), Postives = 141/185 (76.22%), Query Frame = -2 Query: 202 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 756 F++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAG+ ALR +T ED+ + +V K+ Sbjct: 213 FLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKA-GDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKK 396
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 9.561e-51 Identity = 106/191 (55.50%), Postives = 139/191 (72.77%), Query Frame = -2 Query: 187 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNM 756 FIRV GSELVQKYIG+GS++VRE+F MAR+ APSIIF+DE+DSI + R+ +G D EVQRT+++LL ++DGF+ I+++ ATNR D+LD A+LRPGR DR + P P E+R ILKIH +M L ID KK+A+ G SGA+LKA+ TEAGMFA+R+ + V EDF AV KV M +T+K M Sbjct: 221 FIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG-ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKVSMAADTQKMM 410
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.631e-50 Identity = 105/191 (54.97%), Postives = 138/191 (72.25%), Query Frame = -2 Query: 187 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNM 756 FIRV GSELVQKYIG+GS++VRE+F MAR+ APSIIF+DE+DSI + R+ +G D EVQRT+++LL ++DGF+ I+++ ATNR D+LD A+LRPGR DR + P P E+R ILKIH +M L ID KK+A+ G SGA+LKA+ TEAGMFA+R + V E+F AV KV M +T+K M Sbjct: 221 FIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG-ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKVSMAADTQKMM 410 The following BLAST results are available for this feature:
BLAST of DC887343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887343 ID=DC887343; Name=DC887343; organism=Citrus sinensis; type=EST; length=757bpback to top |