DC887343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.169e-48 Identity = 97/189 (51.32%), Postives = 137/189 (72.49%), Query Frame = -2 Query: 190 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 756 FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R V +DFE A V+KK+ +++ Sbjct: 227 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.994e-48 Identity = 99/186 (53.23%), Postives = 133/186 (71.51%), Query Frame = -2 Query: 199 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 756 FIRV GSE VQKY+GEG RMVR++F +A+E++PSIIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ S +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + + RMNL +DL+ + + SGA++ ++C EAGM A+RE R V +D E A V+KK+T Sbjct: 223 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDT 407
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.801e-48 Identity = 96/185 (51.89%), Postives = 133/185 (71.89%), Query Frame = -2 Query: 202 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 756 FIRV GSE VQKY+GEG RMVR++F +A+E++P+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I + +MNL +DL++ + + SGA++ A+C EAGM A+RE R V +DFE +KK+ Sbjct: 224 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEKGYKNNIKKD 407
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.801e-48 Identity = 95/188 (50.53%), Postives = 136/188 (72.34%), Query Frame = -2 Query: 193 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 756 FIRV GSE VQKY+GEG R+VR++F +ARE++P+IIF+DEID+I + R ++ +G D EVQR ++ELLNQ+DGF+ S +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I ++ + +MNL +DL+ + + SGAE++++C EAGM A+R+ R + +DFE +KK T + Sbjct: 212 FIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEKGYKASIKKNTHE 398
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.801e-48 Identity = 92/187 (49.20%), Postives = 140/187 (74.87%), Query Frame = -2 Query: 196 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 756 F++++ +LVQ +IG+G+++VR+ F +A+E +P+IIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF + +++KV+ ATNR+D LD ALLR GR+DRK+EFP PNEE+R+ IL+IHSR+M + I+ +++A + +GA LK+VC EAGM ALR+ + E F + +V ++++ Sbjct: 247 FLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 7.576e-48 Identity = 100/181 (55.25%), Postives = 134/181 (74.03%), Query Frame = -2 Query: 214 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 756 FIRV GSELV K+IGEG+R+VRE+F +ARE APSI+F+DEID+I S R++ G+ +GD EVQRTML+LL +LDGF+ + +KV+ ATNR+D++D A+LRPGR DR IE P P+ RL+IL IH+R+ + +DL+ IA+ G SGA+LKAV EAG A+R +T +D AV KV Sbjct: 201 FIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGT-SGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKV 380
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.204e-47 Identity = 93/184 (50.54%), Postives = 134/184 (72.83%), Query Frame = -2 Query: 205 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKK 756 FIRV+GSE VQKY+GEG RMVR++F +ARE APSI+F+DE+DSI + R ++ S + D EVQR ++ELLNQ+DGF+ + +KV+MATNR D +D ALLRPGR+DRKIEFP P+ + + + +M+L +D++ + + S A++ ++C EAGM A+R R VTQ DFE A +KV+++ Sbjct: 196 FIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDA-STSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVVER 378
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.760e-47 Identity = 95/188 (50.53%), Postives = 136/188 (72.34%), Query Frame = -2 Query: 196 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV-AKVMKKETE 756 FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G D EVQR ++ELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + +MNL +DL+ + + S AE+ A+C EAGM A+R+ R + +DFE A V K +T+ Sbjct: 217 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTD 403
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 4.910e-47 Identity = 96/196 (48.98%), Postives = 135/196 (68.88%), Query Frame = -2 Query: 172 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 756 F++V S +V KYIGE +R++RE+F A+EH P +IFMDEID+IG R G+ + D E+QRT++ELLNQ+DGF+ + K++MATNR D LD ALLRPGR+DRKIE P PNE R++ILKIH +++ ID + + + +G +GA+L+ V TEAG A++E R +V Q D A KV K+ E + +KL Sbjct: 194 FLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQKL 388
BLAST of DC887343 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.413e-47 Identity = 95/189 (50.26%), Postives = 134/189 (70.90%), Query Frame = -2 Query: 190 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 756 FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I + +MNL +DL+ + + SGA++ ++C GM A+RE V +DFE A V+KK+ +++ Sbjct: 227 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQEH 414 The following BLAST results are available for this feature:
BLAST of DC887343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887343 ID=DC887343; Name=DC887343; organism=Citrus sinensis; type=EST; length=757bpback to top |