DC887317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A_PODAN (Histone H2A OS=Podospora anserina GN=HTA1 PE=3 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 3.008e-34 Identity = 78/131 (59.54%), Postives = 88/131 (67.18%), Query Frame = -3 Query: 111 KGGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 503 K G S SRS KAGL FPVGRV R L+KG YAQRVG+G+P AGNAARDNKK RIIPRH+QLA++NDEE +KLLG VTIA GGVLPNIHQNLLPKK + G+ + SQE Sbjct: 6 KSGGKASSGKNAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGTKPGK--NASQE 134
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A2_YEAST (Histone H2A.2 OS=Saccharomyces cerevisiae GN=HTA2 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 3.008e-34 Identity = 74/119 (62.18%), Postives = 86/119 (72.27%), Query Frame = -3 Query: 147 KGGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAA 503 KGG+ S SRS KAGL FPVGRV R L++G YAQR+GSG+P AGNAARDNKK RIIPRH+QLA++ND+E +KLLG+VTIA GGVLPNIHQNLLPKK+A Sbjct: 5 KGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSA 123
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A1_YEAST (Histone H2A.1 OS=Saccharomyces cerevisiae GN=HTA1 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 3.008e-34 Identity = 74/119 (62.18%), Postives = 86/119 (72.27%), Query Frame = -3 Query: 147 KGGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAA 503 KGG+ S SRS KAGL FPVGRV R L++G YAQR+GSG+P AGNAARDNKK RIIPRH+QLA++ND+E +KLLG+VTIA GGVLPNIHQNLLPKK+A Sbjct: 5 KGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSA 123
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A_PHANO (Histone H2A OS=Phaeosphaeria nodorum GN=HTA1 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 74/118 (62.71%), Postives = 83/118 (70.34%), Query Frame = -3 Query: 147 GGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAA 500 GG+ + SRS KAGL FPVGRV R L+KG YAQRVG+G+P AGNAARDNKK RIIPRH+QLA++NDEE +KLLG VTIA GGVLPNIHQNLLPKK A Sbjct: 7 GGKASGSKSSAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTA 124
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A2_PICST (Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 79/132 (59.85%), Postives = 92/132 (69.70%), Query Frame = -3 Query: 111 GGRGR--SKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 500 GG+G+ S + SRS KAGL FPVGRV R L+KG YAQRVGSG+P AGNAARDNKK+RIIPRH+QLA++NDEE +KLLG VTIA GGVLPNIHQ+LLP A+K + G SQE Sbjct: 3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLP----AKKAKPGKASQE 130
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A2_PICGU (Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 76/125 (60.80%), Postives = 87/125 (69.60%), Query Frame = -3 Query: 123 GRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGS 497 G+ D SRS KAGL FPVGR+ R L+KG YAQRVGSG+P AGNAARDNKK+RIIPRH+QLA++NDEE +KLLG VTIA GGVLPNIHQNLLPKK+ KG+ S Sbjct: 5 GKSAGADKASTSRSAKAGLTFPVGRIHRLLRKGNYAQRVGSGAPVYLTSVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSG--KGDKAS 127
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSJ (Probable histone H2A.2 OS=Oryza sativa subsp. japonica GN=Os07g0545400 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 75/116 (64.66%), Postives = 88/116 (75.86%), Query Frame = -3 Query: 150 GRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKA 497 G G +K K +SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P AGNAARDNKK RI+PRHIQLAV+NDEE S+LLG+VTIA+GGV+PNIH LLPKKA Sbjct: 9 GSGAAK--KAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKA 122
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSI (Probable histone H2A.2 OS=Oryza sativa subsp. indica GN=OsI_025469 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 75/116 (64.66%), Postives = 88/116 (75.86%), Query Frame = -3 Query: 150 GRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKA 497 G G +K K +SRS KAGLQFPVGR+ARFLK G+YA+RVG+G+P AGNAARDNKK RI+PRHIQLAV+NDEE S+LLG+VTIA+GGV+PNIH LLPKKA Sbjct: 9 GSGAAK--KAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKA 122
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A1_CANAL (Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 79/132 (59.85%), Postives = 93/132 (70.45%), Query Frame = -3 Query: 111 GGRGRS--KDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 500 GG+G++ + SRS KAGL FPVGRV R L+KG YAQR+GSG+P AGNAARDNKK+RIIPRH+QLA++NDEE +KLLG VTIA GGVLPNIHQNLLPKK+ KG + SQE Sbjct: 3 GGKGKAGTSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSG--KGGV-KASQE 131
BLAST of DC887317 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 5.131e-34 Identity = 74/121 (61.16%), Postives = 87/121 (71.90%), Query Frame = -3 Query: 111 KPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 473 KPVSRS KAGLQFPVGR+ R+LKKGRYAQRVG+G+P AGNAARDNKKNRIIPRH+ LA++NDEE KLL VTIA+GGVLPNI+ LLPKK A + + S++ Sbjct: 24 KPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKADKPAKASKD 144 The following BLAST results are available for this feature:
BLAST of DC887317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887317 ID=DC887317; Name=DC887317; organism=Citrus sinensis; type=EST; length=595bpback to top |