DC887294

Overview
NameDC887294
Unique NameDC887294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12
Identity = 44/149 (29.53%), Postives = 73/149 (48.99%), Query Frame = -1
Query:  304 MTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGV-SCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCR----GRGMCGM 729
            +  AY ++I+  G+  + +YPY   +G C  +    +  +  ++ +  ++     + V + P+A  ++A     Q Y GGV S P  CG   LNH + ++GYG             YWI++NSWG  WG  GY R+ R      G+CG+
Sbjct:   68 VNRAYDFIISNNGVTTDENYPYRAYQGTCNANYFPNSAYITGYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGP--CGFS-LNHAITIIGYG----------RDSYWIVRNSWGSSWGQGGYVRIRRDVSHSGGVCGI 203          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12
Identity = 52/163 (31.90%), Postives = 72/163 (44.17%), Query Frame = -1
Query:  295 YKYLIATG-----GLEEESSYPYIGKRGKCQ-------FDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA----------IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 717
            + YLIA       GL EE+ +PY G    C+       + SE   V    F     +E  +   LV HGP+A+              I+  T +     P     +  NH VLLVGYG    S        YWI+KNSWG +WG+ GY+R+ RG   C + ++
Sbjct:  275 FPYLIAGKYAQDFGLVEEACFPYAGSDSPCKPNDCFRYYSSEYYYV--GGFYGA-CNEALMKLELVRHGPMAVAFEVYDDFFHYQKGIYYHTGLRDPFNPF----ELTNHAVLLVGYGTDSAS-----GMDYWIVKNSWGSRWGEDGYFRIRRGTDECAIESI 425          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12
Identity = 41/135 (30.37%), Postives = 63/135 (46.67%), Query Frame = -1
Query:  325 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTN---IPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCR 720
            A++++   GG+  +  Y Y G+        E    RV        +PV++       V + P+++ ++A  M  Y  GV     C   W +H VL+VGYG             YW+I+NSWG +WG+ GY RL R
Sbjct:  200 AFEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVMISAANMSDYKSGVYKGA-CSNLWGDHNVLIVGYGTSS------DEGDYWLIRNSWGPEWGEGGYLRLQR 327          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12
Identity = 50/142 (35.21%), Postives = 68/142 (47.89%), Query Frame = -1
Query:  304 MTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 729
            M +A++Y +A  GL E   YPY  K G C+   ++    V  F +I  D     A  +    +A+ ++A   Q Y  GV     C K  LNHGV+LVG  A G           W I+NSWG  WG+ G+ RL  G   CG+
Sbjct:  180 MDSAFEY-VADNGLAEAKDYPYTAKDGTCKTSVKRPYTHVQGFKDI--DSCDELAQTIQERTVAVAVDANPWQFYRSGVLSK--CTKN-LNHGVVLVGVQADGA----------WKIRNSWGSSWGEAGHIRLA-GGDTCGI 304          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12
Identity = 44/148 (29.73%), Postives = 67/148 (45.27%), Query Frame = -1
Query:  295 GLEEESSYPYIGK-RGKCQFDSEKIAVRVANFTNI-----PVDENQIAAHLVHHGPLAIGLNAIF-MQTYIGGVSCPLICGK--------KWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 693
            GL ++   PY G+  GKC            +++ I       +E  +   L+ +GP  +G       Q Y  G+                +  NH VLLVGYG       +L  +PYW +KNSWG +WG+ GY+R+ RG   CG+ ++
Sbjct:  304 GLPQKIVIPYTGEDTGKCTVSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFEVYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVD-----KLSGEPYWKVKNSWGVEWGEQGYFRILRGTDECGVESL 446          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.178e-12
Identity = 50/158 (31.65%), Postives = 75/158 (47.47%), Query Frame = -1
Query:  295 YKYLIATG-----GLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIP-----VDENQIAAHLVHHGPLAIGLNAI--FMQTYIG-----GVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 717
            + YLIA       G+ EES +PY  K   C+     +    +++  +       +E  +   LV HGP+A+       F+  + G     G+S P     +  NH VLLVGYG    + +      YWIIKNSWG  WG+ GY+R+ RG   C + ++
Sbjct:  301 FPYLIAGKYAQDFGVVEESCFPYTAKDSPCKPRENCLRYYSSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFN-PFELTNHAVLLVGYGRDPVTGIE-----YWIIKNSWGSNWGESGYFRIRRGTDECAIESI 452          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.178e-12
Identity = 48/161 (29.81%), Postives = 70/161 (43.48%), Query Frame = -1
Query:  295 YKYLIATG-----GLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIP-----VDENQIAAHLVHHGPLAIGLNA----------IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTM 717
            + YLIA       GL EE  +PY G    C+          + +  +       +E  +   LVH GP+A+              ++  T +     P     +  NH VLLVGYG    S L      YWI+KNSWG  WG++GY+R+ RG   C + ++
Sbjct:  302 FPYLIAGKYAQDFGLVEEDCFPYTGTDSPCRLKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHQGPMAVAFEVYDDFLHYRKGVYHHTGLRDPFNPF----ELTNHAVLLVGYGTDAASGL-----DYWIVKNSWGTSWGENGYFRIRRGTDECAIESI 453          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 43/147 (29.25%), Postives = 67/147 (45.58%), Query Frame = -1
Query:  298 TNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKW--LNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNT 726
            +N Y Y+I  G + +ES YPY G    C+ + +  A ++  +T +P +        +  G + + ++A     Q Y  G      C   +  LNH V  VGYG        +  +  WI++NSWG  WGD GY  +      CG+ T
Sbjct:  167 SNVYDYIIEHG-VAKESDYPYTGSDSTCKTNVKSFA-KITGYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGV-------VDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 304          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 43/147 (29.25%), Postives = 67/147 (45.58%), Query Frame = -1
Query:  298 TNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPL--AIGLNAIFMQTYIGGVSCPLICGKKW--LNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNT 726
            +N Y Y+I  G + +ES YPY G    C+ + +    ++  +T +P +        +  G L  +I +++   Q Y  G      C   +  LNH V  VGYG        +  +  WI++NSWG  WGD GY  +      CG+ T
Sbjct:  162 SNVYDYIIEHG-VAKESDYPYTGSDSTCKTNVKSFR-KITGYTKVPRNNEAELKAALSQGLLDVSIDVSSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGV-------VDGKECWIVRNSWGTSWGDKGYINMVIEGNTCGVAT 299          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = -1
Query:  430 MTNAYKYLIATGGLEEESSYPYIGKRG-KCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGKKWLNHGVLLVGYG 729
            MT A++Y+I   G++ ESSYPY  + G KC+F+ + +A +++++ N+        A  V  GP ++ ++A     Q Y+ G+     C    L+HGVL VG+G
Sbjct:  181 MTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAAQLSSYVNVTSGSESDLAAKVTQGPTSVAIDASNQSFQLYVSGIYNEPACSSTQLDHGVLAVGFG 283          
The following BLAST results are available for this feature:
BLAST of DC887294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
MDO1_PSEMR4.794e-1229.53Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CATC_CANFA4.794e-1231.90Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CPR2_ARATH6.262e-1230.37Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATL1_PARTE6.262e-1235.21Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATC_SCHMA6.262e-1229.73Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
CATC_MOUSE8.178e-1231.65Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CATC_BOVIN8.178e-1229.81Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CPP2_ENTHI1.395e-1129.25Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
ACP2_ENTHI1.822e-1129.25Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CYSP7_DICDI2.379e-1133.98Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionDC887294 EIC Citrus sinensis cDNA clone EIC0152 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887294 ID=DC887294; Name=DC887294; organism=Citrus sinensis; type=EST; length=729bp
AACGTANTGCAACAGAAATTAAAGATAAAATATACCCAAAATACTTTCTG
GAAGACACAATAGTATGTAGAAGAGCAGGTCTGAAAAGCATTTTCAAGTC
TAATCCAGAACTTACTTGAGAAAGGGGAATTATGAAACCGGAAAAGCTTC
AATAATTAGAAGATCACAAACAAGAACAAAAGGGAAACTAGCTACCATAT
AACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGAG
GGACTTCAAGTTTAGGAGGAGACTTGAGTGACCACTGCAGAAACCATGGT
GTTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGGT
CTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATACGGCTGGTTT
CCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACGAGCAGAAC
GCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATGAGACTCCCC
CAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACCG
TGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGGT
AAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTGC
CACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGTC
GCGATCAAATATTTGTATGCATTTGTCAT
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