DC887294

Overview
NameDC887294
Unique NameDC887294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = -1
Query:  304 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 720
            A++ +I  GG++ ES YPY      C+ ++ K  V+V + +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +        N PYW  KN+WG  WG+ G++R+ +    CGM
Sbjct:  182 AFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII--KYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEEGFFRVQQNINACGM 312          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = -1
Query:  304 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 720
            A++ ++  GG++ ES YPY    G C+ ++ K  V+V   +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGY  +          P+WI+KN+WG  WG+ GY+R+ +    CG+
Sbjct:  183 AFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGIM--KYCANHGLNHAVLLVGYAVEN-------GVPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = -1
Query:  304 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 720
            A++ +I  GG++ ES YPY      C+ +S K  V+V + +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +        N PYW  KN+WG  WG+ G++R+ +    CGM
Sbjct:  182 AFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGII--KYCFDSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17
Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = -1
Query:  295 MTNAYKYLIATGGLEEESSYPYIGKRGKCQFDS-EKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG----RGMCGMNTM 729
            M  A++Y++  GGL +E  YPY  + G C+    E   V +    ++P ++ +     + H PL++ ++A     Q Y GGV     CG   L+HGV  VGYG+   S        Y I+KNSWG +WG+ GY RL R      G+CG+N M
Sbjct:  206 MDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGR-CGVD-LDHGVAAVGYGSSKGS-------DYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKM 348          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = -1
Query:  319 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHH-GPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR 720
            AY+Y+IA  G++ ESSYPY      C++D+  I   V+++      +     H V + GP+++ ++A      +Y GGV     C   + NH V  VGYG             YWI+KNSWG  WG+ GY ++ R R
Sbjct:  178 AYQYIIANRGIDTESSYPYKAIDDNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDA------NGGDYWIVKNSWGAWWGESGYIKMARNR 308          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17
Identity = 46/140 (32.86%), Postives = 75/140 (53.57%), Query Frame = -1
Query:  304 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 720
            AY+ ++  GG++ E+ YPY    G C+ ++ K  VRV   +  + + E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +          P+WI+KN+WG  WG+ GY+R+ +    CG+
Sbjct:  183 AYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVGYKRGII--RYCENHGLNHAVLLVGYGVEN-------GIPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17
Identity = 47/140 (33.57%), Postives = 79/140 (56.43%), Query Frame = -1
Query:  304 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLIC-GKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 720
            A + ++  GG+    + PY G  G C+    ++++  +    +  +EN++   LV +GP+++ ++   +  Y  G++   IC   + LNH VLLVGYG K        + PYWI+KNSWG +WG+ GY+R+ R +  CGM
Sbjct:  194 ALESILQEGGVVSAENEPYYGFDGVCKKSPFELSISGSR-RYVLQNENKLRELLVVNGPISVAIDVSDLINYKAGIAD--ICENNEGLNHAVLLVGYGVKN-------DVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 48/145 (33.10%), Postives = 73/145 (50.34%), Query Frame = -1
Query:  298 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNT 720
            A  Y+   GG++ ESSYPY  +   C+F+S  I      +  I    E+ +       GP+++ ++A     Q+Y  GV     C    L+H VL VGYG++G        Q +W++KNSW   WG+ GY ++ R R   CG+ T
Sbjct:  178 AIMYVRDNGGVDTESSYPYEARDNTCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEG-------GQDFWLVKNSWATSWGESGYIKMARNRNNNCGIAT 315          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = -1
Query:  304 NAYKYLIATGGLEEESSYPYIG--KRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGV--SCPLICGKKWLNHGVLLVGYG-----------AKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 723
            +A+  ++   GL  E  YP+ G  K  +C          + +F  +P +E +IA +L   GP+ + +N   ++ Y  GV  + P  C    ++H VLLVG+G           A G       + P+WI+KNSWG +WG  GY+RL RG   CG+
Sbjct:  198 DAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTINMKLLKLYKKGVIEATPTSCDPFLVDHSVLLVGFGKSESVADRRAGAAGAQPQSRRSIPFWILKNSWGTKWGXGGYFRLYRGNNTCGI 352          
BLAST of DC887294 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17
Identity = 51/152 (33.55%), Postives = 77/152 (50.66%), Query Frame = -1
Query:  295 MTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKI-AVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG----RGMCGMNTM 729
            M +A+ ++I  GG++ E  YPY    GKC  + E    V +  F ++P ++ +     V H P+++ + A     Q Y  GV     CG   L+HGV+ VGYG           + YWI++NSWG +WG+ GY R+ R      G CG+  M
Sbjct:  210 MDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTS-LDHGVVAVGYGTDN-------GKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMM 352          
The following BLAST results are available for this feature:
BLAST of DC887294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CATV_NPVRO3.790e-1734.29Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVCF3.790e-1732.86Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVBM3.790e-1735.00Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
XCP2_ARATH4.950e-1735.53Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CRUST_PANBO4.950e-1734.31Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATV_NPVAP4.950e-1732.86Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATV_GVCP4.950e-1733.57Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CYSP1_HOMAM6.465e-1733.10Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATW_FELCA6.465e-1732.26Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
ORYB_ORYSJ8.443e-1733.55Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]

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Properties
Property NameValue
Genbank descriptionDC887294 EIC Citrus sinensis cDNA clone EIC0152 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887294 ID=DC887294; Name=DC887294; organism=Citrus sinensis; type=EST; length=729bp
AACGTANTGCAACAGAAATTAAAGATAAAATATACCCAAAATACTTTCTG
GAAGACACAATAGTATGTAGAAGAGCAGGTCTGAAAAGCATTTTCAAGTC
TAATCCAGAACTTACTTGAGAAAGGGGAATTATGAAACCGGAAAAGCTTC
AATAATTAGAAGATCACAAACAAGAACAAAAGGGAAACTAGCTACCATAT
AACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGAG
GGACTTCAAGTTTAGGAGGAGACTTGAGTGACCACTGCAGAAACCATGGT
GTTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGGT
CTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATACGGCTGGTTT
CCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACGAGCAGAAC
GCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATGAGACTCCCC
CAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACCG
TGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGGT
AAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTGC
CACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGTC
GCGATCAAATATTTGTATGCATTTGTCAT
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