DC887281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.219e-23 Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = -1 Query: 118 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 279 I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.101e-22 Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = -1 Query: 118 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 282 TI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22 Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = -1 Query: 124 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 282 TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 11 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.656e-19 Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = -1 Query: 118 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 282 T+ VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 22 TVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 7.387e-19 Identity = 43/55 (78.18%), Postives = 50/55 (90.91%), Query Frame = -1 Query: 118 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 282 T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 22 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = -1 Query: 115 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGE 282 TID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG+ Sbjct: 22 TIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGQ 77
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14 Identity = 37/55 (67.27%), Postives = 44/55 (80.00%), Query Frame = -1 Query: 118 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 282 TID VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 22 TIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.883e-14 Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = -1 Query: 118 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 282 TID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 22 TIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.883e-14 Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = -1 Query: 118 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 282 TID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 22 TIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of DC887281 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.459e-14 Identity = 33/55 (60.00%), Postives = 44/55 (80.00%), Query Frame = -1 Query: 115 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGE 279 +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLVL LRGG+ Sbjct: 23 VDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGD 77 The following BLAST results are available for this feature:
BLAST of DC887281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887281 ID=DC887281; Name=DC887281; organism=Citrus sinensis; type=EST; length=282bpback to top |