DC887266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_METM5 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.303e-13 Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = -3 Query: 208 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 459 TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C+ CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRAGTSIWVCEKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_METVS (50S ribosomal protein L37Ae OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.635e-13 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = -3 Query: 208 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 459 TKK G G++G RYG +R +++ +E+ Q+ +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGPRYGRKIRVRLRDVEIKQNKEYKCPVCAFPKLKRAGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_METM7 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.359e-13 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = -3 Query: 208 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 459 TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_METM6 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.359e-13 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = -3 Query: 208 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 459 TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_THESM (50S ribosomal protein L37Ae OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.612e-13 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = -3 Query: 265 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 462 RTKK G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY Sbjct: 3 RTKKVGSAGRFGPRYGLKIRRRVAAVEEKMRQKHTCPVCGRKAVRRISTGIWQCQKCGATFAGGAY 68
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_ARCFU (50S ribosomal protein L37Ae OS=Archaeoglobus fulgidus GN=rpl37ae PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.639e-12 Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = -3 Query: 223 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI 462 RTKK G++G RYG +R+ ++E Q KY C+ CGK AVKR GIW C+ CG AGG Y T V ++ Sbjct: 3 RTKKVRSAGRFGPRYGLRVRRTWLEIEAVQRQKYVCKKCGKKAVKRSGTGIWECRHCGYKFAGGCYQPVTPGGKIVEKSV 82
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_THEON (50S ribosomal protein L37Ae OS=Thermococcus onnurineus (strain NA1) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.141e-12 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = -3 Query: 265 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 462 RT K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAY 68
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_THEGJ (50S ribosomal protein L37Ae OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.141e-12 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = -3 Query: 223 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI 462 RT K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY T + + + Sbjct: 3 RTVKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPTTPAGKVAKRVV 82
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_PYRKO (50S ribosomal protein L37Ae OS=Pyrococcus kodakaraensis GN=rpl37ae PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.141e-12 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = -3 Query: 226 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNT-ASAVTVRST 462 RT K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY T A V R T Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPTTPAGKVAKRVT 82
BLAST of DC887266 vs. ExPASy Swiss-Prot
Match: RL37A_THEAC (50S ribosomal protein L37Ae OS=Thermoplasma acidophilum GN=rpl37ae PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12 Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = -3 Query: 262 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYT 471 M+KRT K G+ G++G RYG ++RK+ ++ + + Y C C K VKR A GIW C+ CG AGG+YT Sbjct: 1 MSKRTVKVGVAGRFGPRYGVTIRKEWSEIYKQKIALYTCPSCKKKRVKRVANGIWQCRHCGYKFAGGSYT 70 The following BLAST results are available for this feature:
BLAST of DC887266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887266 ID=DC887266; Name=DC887266; organism=Citrus sinensis; type=EST; length=554bpback to top |